RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CGB7P0DN87 165 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 OMGP23515 440 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 HTR1DP28221 377 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 CD34P28906 385 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 DLX1P56177 255 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 RPL15P61313 204 aaKnown RBP9.17□□□□□ -0.94
SF3B6-201ENST00000233468 UBA52P62987 128 aaKnown RBP9.17□□□□□ -0.94
SF3B6-201ENST00000233468 PRB3Q04118 309 aaPredicted RBP9.17□□□□□ -0.94
SF3B6-201ENST00000233468 SLC9A3R2Q15599 337 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 Q3ZCU0 254 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 C6orf201Q7Z4U5 140 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 ZDHHC22Q8N966 263 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 OR9G1Q8NH87 305 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 NDNFQ8TB73 568 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 KIRREL1Q96J84 757 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 NICN1Q9BSH3 213 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 FAAP24Q9BTP7 215 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 FUNDC2Q9BWH2 189 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 MEGF9Q9H1U4 602 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 ABCB10Q9NRK6 738 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 ZNF581Q9P0T4 197 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 DPM3Q9P2X0 92 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 SERPINE3A8MV23 424 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 SDCBPO00560 298 aaPredicted RBP9.16□□□□□ -0.94
SF3B6-201ENST00000233468 SOCS1O15524 211 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 RGS11O94810 467 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 CD3GP09693 182 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 SSTR5P35346 364 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 IER3P46695 156 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 ACTG1P63261 375 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 IDNKQ5T6J7 187 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 CCDC144NLQ6NUI1 221 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 C16orf87Q6PH81 154 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 ANKRD13BQ86YJ7 626 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 DTX3Q8N9I9 347 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 OR10R2Q8NGX6 335 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 OR4K15Q8NH41 348 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 RFESDQ8TAC1 157 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 GALMQ96C23 342 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 CMSS1Q9BQ75 279 aaKnown RBP9.16□□□□□ -0.94
SF3B6-201ENST00000233468 SULT4A1Q9BR01 284 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 ATG5Q9H1Y0 275 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 KCNK15Q9H427 330 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 RAB18Q9NP72 206 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 C12orf4Q9NQ89 552 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 MBNL3Q9NUK0 354 aaKnown RBP9.16□□□□□ -0.94
SF3B6-201ENST00000233468 ZNRD1Q9P1U0 126 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 SCOCQ9UIL1 159 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 TGP01266 2768 aa9.16□□□□□ -0.94
SF3B6-201ENST00000233468 A0A0A6YYD4 124 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 A0A0A6YYH2 397 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 MDFIC2A0A1B0GVS7 189 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 SMIM30A4D0T7 59 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 A6NJ64 397 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 OOSP1A8MZH6 123 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 C12orf77C9JDV5 145 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 F2RL2O00254 374 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 KCNAB3O43448 404 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 NOL3O60936 208 aaKnown RBP9.15□□□□□ -0.94
SF3B6-201ENST00000233468 MMP23AO75900 390 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 LPLP06858 475 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 SLC2A2P11168 524 aaPredicted RBP9.15□□□□□ -0.94
SF3B6-201ENST00000233468 IL3RAP26951 378 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 TALDO1P37837 337 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 RPL5P46777 297 aaKnown RBP9.15□□□□□ -0.94
SF3B6-201ENST00000233468 SERPINB10P48595 397 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 LSM3P62310 102 aaKnown RBP9.15□□□□□ -0.94
SF3B6-201ENST00000233468 LTC4SQ16873 150 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 LRRC75BQ2VPJ9 315 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 STEAP3Q658P3 488 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 NR2C2APQ86WQ0 139 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 PRR18Q8N4B5 295 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 C8orf31Q8N9H6 132 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 OR10X1Q8NGY0 326 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 SETD6Q8TBK2 473 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 MRPL30Q8TCC3 161 aaKnown RBP9.15□□□□□ -0.94
SF3B6-201ENST00000233468 DYRK2Q92630 601 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 ARHGAP5-AS1Q96IT6 56 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 SSX3Q99909 188 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 PECRQ9BY49 303 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 MMP28Q9H239 520 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 RNF167Q9H6Y7 350 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 TAF9BQ9HBM6 251 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 ESM1Q9NQ30 184 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 GNG12Q9UBI6 72 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 PITPNC1Q9UKF7 332 aa9.15□□□□□ -0.94
SF3B6-201ENST00000233468 SOX21Q9Y651 276 aaPredicted RBP9.15□□□□□ -0.94
SF3B6-201ENST00000233468 TRBV6-6A0A0A6YYG2 114 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 TRAV39A0A0B4J263 110 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 FOXI3A8MTJ6 420 aaPredicted RBP9.14□□□□□ -0.95
SF3B6-201ENST00000233468 VGLL3A8MV65 326 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 C15orf65H3BRN8 121 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 J3QR06 171 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 NAPSAO96009 420 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 IGLV1-47P01700 117 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 HBZP02008 142 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 CLEC2LP0C7M8 214 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 HIST1H1DP16402 221 aaKnown RBP9.14□□□□□ -0.95
SF3B6-201ENST00000233468 RCC1P18754 421 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms