RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SLC25A32Q9H2D1 315 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 MYOZ1Q9NP98 299 aaPredicted RBP8.52□□□□□ -1.05
USP11-201ENST00000218348 OSGIN2Q9Y236 505 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 RNF222A6NCQ9 220 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 FOXI3A8MTJ6 420 aaPredicted RBP8.52□□□□□ -1.05
USP11-201ENST00000218348 SFT2D2O95562 160 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 IGHV2-5P01817 119 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 C4BPBP20851 252 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 PSMB6P28072 239 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 CALCRP30988 508 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 ASCL1P50553 236 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 UBE2NP61088 152 aaKnown RBP8.52□□□□□ -1.05
USP11-201ENST00000218348 OR8B8Q15620 311 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 MRPL24Q96A35 216 aaKnown RBP8.52□□□□□ -1.05
USP11-201ENST00000218348 APOBEC3DQ96AK3 386 aaPredicted RBP8.52□□□□□ -1.05
USP11-201ENST00000218348 TMEM45BQ96B21 275 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 VPS25Q9BRG1 176 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 REPIN1Q9BWE0 567 aaKnown RBP8.52□□□□□ -1.05
USP11-201ENST00000218348 TM2D1Q9BX74 207 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 PRORYQ9H606 182 aa8.52□□□□□ -1.05
USP11-201ENST00000218348 VSTM5A8MXK1 200 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 TRAPPC2LH3BP13 241 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 SCTP09683 121 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 FPR2P25090 351 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 CEBPDP49716 269 aaPredicted RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 RAB5CP51148 216 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 FABP6P51161 128 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 RBM11P57052 281 aaKnown RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 RNPS1Q15287 305 aaKnown RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 IAH1Q2TAA2 248 aaPredicted RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 R3HDM4Q96D70 268 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 IP6K3Q96PC2 410 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 GAR1Q9NY12 217 aaKnown RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 OR14J1Q9UGF5 321 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 ANKRD30BLA7E2S9 258 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 HMSDA8MTL9 139 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 K7EM74 188 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 AGPAT2O15120 278 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 OR5AC1P0C628 307 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 LINC00614P0C842 121 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 ZNF728P0DKX0 622 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 RCC1P18754 421 aaPredicted RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 NCR3LG1Q68D85 454 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 PEG10Q86TG7 708 aaKnown RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 HIST1H2BAQ96A08 127 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 DIRC2Q96SL1 478 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 SPTAN1Q13813 2472 aaKnown RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 COL12A1Q99715 3063 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 SIRPB1O00241 398 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 ITGB1BP1O14713 200 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 PDCD6O75340 191 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 IFNA10P01566 189 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 IL2RAP01589 272 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 DAOP14920 347 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 RPA2P15927 270 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 TBPP20226 339 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 AADACP22760 399 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 IGHV1-2P23083 117 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 BATFQ16520 125 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 TMEM42Q69YG0 159 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 RPRMLQ8N4K4 120 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 OR1K1Q8NGR3 316 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 PRDM14Q9GZV8 571 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 ZNF107Q9UII5 783 aaPredicted RBP8.51□□□□□ -1.05
USP11-201ENST00000218348 TNFSF18Q9UNG2 199 aa8.51□□□□□ -1.05
USP11-201ENST00000218348 TMEM8BA6NDV4 472 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 ZNF891A8MT65 544 aaPredicted RBP8.5□□□□□ -1.05
USP11-201ENST00000218348 H0YL77 283 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 KLK10O43240 276 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 ACTL6AO96019 429 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 IFNA2P01563 188 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 FUT3P21217 361 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 MPGP29372 298 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 ALDH3B1P43353 468 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 ZNF826PQ6ZT77 177 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 LYZL2Q7Z4W2 148 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 SGPP2Q8IWX5 399 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 MKXQ8IYA7 352 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 C9orf106Q8NAJ2 232 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 TMED6Q8WW62 240 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 RTN4IP1Q8WWV3 396 aaPredicted RBP8.5□□□□□ -1.05
USP11-201ENST00000218348 NUDT11Q96G61 164 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 IGSF10Q6WRI0 2623 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 PKD1L2Q7Z442 2459 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 CDIPTO14735 213 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 HSD17B6O14756 317 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 PHF1O43189 567 aaPredicted RBP8.5□□□□□ -1.05
USP11-201ENST00000218348 TAS2R31P59538 309 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 HERV-K104P61576 105 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 ACTBL2Q562R1 376 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 GFI1BQ5VTD9 330 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 LHFPL1Q86WI0 220 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 OR1J1Q8NGS3 322 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 PACRGQ96M98 296 aaPredicted RBP8.5□□□□□ -1.05
USP11-201ENST00000218348 RNF126Q9BV68 326 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 LINC00470Q9BZP3 86 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 CDH20Q9HBT6 801 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 CBLN4Q9NTU7 201 aa8.5□□□□□ -1.05
USP11-201ENST00000218348 NECAP2Q9NVZ3 263 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms