RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 NKX2-1P43699 371 aaPredicted RBP11.2□□□□□ -0.62
CTNS-201ENST00000046640 IDH3GP51553 393 aaPredicted RBP11.2□□□□□ -0.62
CTNS-201ENST00000046640 VAMP2P63027 116 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 TLE1Q04724 770 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 HERPUD1Q15011 391 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 ZNF674Q2M3X9 581 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 RNF212Q495C1 297 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 ALKBH2Q6NS38 261 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 ZNF818PQ6ZRF7 136 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 GAPTQ8N292 157 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 TMEM171Q8WVE6 324 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 TCTEX1D2Q8WW35 142 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 WDYHV1Q96HA8 205 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 SUCNR1Q9BXA5 334 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 CACNA1DQ01668 2161 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 FGF12P61328 243 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 RNPS1Q15287 305 aaKnown RBP11.19□□□□□ -0.62
CTNS-201ENST00000046640 ALKBH6Q3KRA9 238 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 GPR157Q5UAW9 335 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 CDPF1Q6NVV7 123 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 TBC1D26Q86UD7 250 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 DEFB124Q8NES8 71 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 BOD1Q96IK1 185 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 ARV1Q9H2C2 271 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 CCL28Q9NRJ3 127 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
CTNS-201ENST00000046640 ZFHX2Q9C0A1 2572 aaPredicted RBP11.19□□□□□ -0.62
CTNS-201ENST00000046640 RBFOX3A6NFN3 312 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 AP4M1O00189 453 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 MPPED1O15442 326 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 TK1P04183 234 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 DYNLT3P51808 116 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 ZNF154Q13106 437 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 NRN1LQ496H8 165 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 C9orf152Q5JTZ5 239 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 GALNT14Q96FL9 552 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 GTF3C1Q12789 2109 aa11.19□□□□□ -0.62
CTNS-201ENST00000046640 IGKV1-6A0A0C4DH72 117 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 H3BQ15 152 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 SOX8P57073 446 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 UBE2KP61086 200 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 RND3P61587 244 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 IL13RA2Q14627 380 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 FBXW9Q5XUX1 488 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 CNEP1R1Q8N9A8 125 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 OR1K1Q8NGR3 316 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 RAB39BQ96DA2 213 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 OR2J1Q9GZK6 312 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 Q9N2K0 584 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 K7N7A8 449 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 GATCO43716 136 aaKnown RBP11.18□□□□□ -0.62
CTNS-201ENST00000046640 PLA2G5P39877 138 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 EIF2S3P41091 472 aaKnown RBP11.18□□□□□ -0.62
CTNS-201ENST00000046640 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 CXorf67Q86X51 503 aaPredicted RBP11.18□□□□□ -0.62
CTNS-201ENST00000046640 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 TECTBQ96PL2 329 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 TCEAL7Q9BRU2 100 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 GLRX2Q9NS18 164 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 CYB561D1Q8N8Q1 229 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 FDCSPQ8NFU4 85 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 TRIB1Q96RU8 372 aa11.18□□□□□ -0.62
CTNS-201ENST00000046640 STRAPQ9Y3F4 350 aaKnown RBP11.18□□□□□ -0.62
CTNS-201ENST00000046640 TGIF2-C20orf24A0A0A6YYL0 155 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 PROB1E7EW31 1015 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 SIRPB1O00241 398 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 AGFG2O95081 481 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 IFNA17P01571 189 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 IGHV2-5P01817 119 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 CXCL1P09341 107 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 C4orf17Q53FE4 359 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 SLC25A24Q6NUK1 477 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 CCDC71LQ8N9Z2 235 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 OR5A2Q8NGI9 324 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 OR51H1Q8NH63 302 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 LOXL4Q96JB6 756 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 WRBO00258 174 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 LY86O95711 162 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 FOSL1P15407 271 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 WT1P19544 449 aaPredicted RBP11.17□□□□□ -0.62
CTNS-201ENST00000046640 MDKP21741 143 aaPredicted RBP11.17□□□□□ -0.62
CTNS-201ENST00000046640 PAX6P26367 422 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 RHEBQ15382 184 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 TMEM252Q8N6L7 170 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 BCL2L2Q92843 193 aaPredicted RBP11.17□□□□□ -0.62
CTNS-201ENST00000046640 FZR1Q9UM11 496 aa11.17□□□□□ -0.62
CTNS-201ENST00000046640 TRAV24A0A0B4J272 114 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 TRDCB7Z8K6 153 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 CHST1O43916 411 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 TMEM50AO95807 157 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 NAPSAO96009 420 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 TFF1P04155 84 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 GRPP07492 148 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 DLK1P80370 383 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 OR2B11Q5JQS5 317 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 FAM58AQ8N1B3 248 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 COMMD1Q8N668 190 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 TMED3Q9Y3Q3 217 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms