RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 CD5P06127 495 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 CRYBB2P43320 205 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 PLP1P60201 277 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 GNB2P62879 340 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 OR4A5Q8NH83 315 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 FLYWCH2Q96CP2 140 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 MBNL1Q9NR56 388 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 FAHP16930 419 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 WDFY1Q8IWB7 410 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 GBGT1Q8N5D6 347 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 MARS2Q96GW9 593 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ZBTB42B2RXF5 422 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 SYNGR1O43759 233 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 HPRT1P00492 218 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 HPXP02790 462 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 DAOP14920 347 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 FMODQ06828 376 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 LINC00303Q3SY05 128 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 SAPCD1Q5SSQ6 148 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 TSPAN32Q96QS1 320 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 METTL1Q9UBP6 276 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ADAM20O43506 726 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 PXNP49023 591 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 TMEM136Q6ZRR5 245 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 OR51B6Q9H340 312 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 F5H697 171 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ICOSLGO75144 302 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ISG15P05161 165 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 UCP2P55851 309 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 POLR2GP62487 172 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 KCNAB1Q14722 419 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 S100A7L2Q5SY68 101 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 IER5LQ5T953 404 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 BADQ92934 168 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 SIGLEC11Q96RL6 698 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 MGST2Q99735 147 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 PSMG3Q9BT73 122 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 TMEM30AQ9NV96 361 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 FITM1A5D6W6 292 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 UPK1AO00322 258 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 PRSS23O95084 383 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ADIPOQQ15848 244 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 NRN1LQ496H8 165 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 CA5BP1Q8WTZ4 195 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 FOXB1Q99853 325 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 MFRPQ9BY79 579 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ASB1Q9Y576 335 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 K7N7A8 449 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 UBE2L6O14933 153 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 RELQ04864 619 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 HERPUD1Q15011 391 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 PLAC9Q5JTB6 97 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ACSM6Q6P461 480 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 MAVSQ7Z434 540 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 GUCD1Q96NT3 240 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 OR2D2Q9H210 308 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 SLC26A1Q9H2B4 701 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 FOXD3Q9UJU5 478 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ZFYVE26Q68DK2 2539 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 NRG2O14511 850 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 PRICKLE3O43900 615 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 FSTP19883 344 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 HOXC5Q00444 222 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 PRR14Q9BWN1 585 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 MS4A7Q9GZW8 240 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 V9GYH0 126 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 H3BRM9 83 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 EFSO43281 561 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ATP5LO75964 103 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 TMEM78Q5T7P6 136 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 C4orf45Q96LM5 186 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 WIPI2Q9Y4P8 454 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 TRGV5A0A0B4J1U4 118 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ZC3H12DA2A288 527 aaKnown RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF735P0CB33 412 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 OR4C12Q96R67 309 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 RRN3P1Q2M238 152 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 TBC1D26Q86UD7 250 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 KLHDC9Q8NEP7 349 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 LINC00597Q9H2U6 94 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 MAP1LC3AQ9H492 121 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF106Q9H2Y7 1883 aaKnown RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 C7orf66A4D0T2 115 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 FAM221AA4D161 298 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 GPX4P36969 197 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 CLDN2P57739 230 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 MLF1P58340 268 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 ERVFRD-1P60508 538 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 NECAP1Q8NC96 275 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 OR8D4Q8NGM9 314 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 LSM10Q969L4 123 aaKnown RBP5.37□□□□□ -1.55
VPS13D-201ENST00000011700 DMRT1Q9Y5R6 373 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 TCRBV5S1A1TA0A578 114 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 PRF1P14222 555 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 PTGDSP41222 190 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 PPP1R1AQ13522 171 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 FNDC7Q5VTL7 733 aa5.37□□□□□ -1.55
VPS13D-201ENST00000011700 PTCRAQ6ISU1 281 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms