RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Zfp456B2RUK9 458 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Gm15130F6PYN5 206 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Olfr628K7N6B2 316 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Cbfa2t3O54972 620 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 SgceO70258 437 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 SgcaP82350 387 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Nhlh1Q02576 133 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Olfr125Q14AJ9 320 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Mrgprb2Q3KNA1 338 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 AccslQ3UX83 580 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Srrm4Q8BKA3 608 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Dhrs7cQ8CHS7 311 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Znf281Q99LI5 893 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Rcc1lQ9CYF5 461 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Q9DAS2 200 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Mcts1Q9DB27 181 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Plekha3Q9ERS4 297 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Smco4Q9JIS3 59 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Gm28870A0A0A6YW38 222 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Igkv4-63A0A0G2JFU6 117 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Olfr1157A2AVC4 312 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 BC048679D3YXE9 172 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Slc18b1D3Z5L6 459 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Klk1b26P36369 261 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Defb46Q4QY34 57 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Lhfpl4Q5U4E0 247 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Actbl2Q8BFZ3 376 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Zbtb49Q8BXX2 756 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Ly6g6eQ8K1T6 166 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Olfr1449Q8VEV8 314 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Olfr488Q8VG02 314 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Olfr1280Q8VGG8 305 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Taf9Q8VI33 264 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Asb5Q9D1A4 329 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Lysmd2Q9D7V2 215 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Ppp1r35Q9D8C8 260 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 1700025F22RikQ9D9Y7 111 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Olfr957Q9EQB7 311 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Gnpnat1Q9JK38 184 aa10.15□□□□□ -0.78
Col9a1-202ENSMUST00000088349 Olfr554E9Q546 317 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Zfp688E9Q5M9 274 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Vmn1r173E9Q8V7 313 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Irf2P23906 349 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Zfp36l2P23949 484 aaKnown RBP10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Rab3dP35276 219 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Dnase2P56542 353 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 SelenohQ3UQA7 116 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Gramd2aQ3V3G7 320 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Nxph1Q61200 271 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Znf574Q8BY46 900 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Mfsd6lQ8R3N2 586 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr642Q924X8 314 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr632Q9EPN9 317 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Fbxw4Q9JMJ2 410 aa10.15□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Dmxl2Q8BPN8 3032 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr69E9Q7C5 316 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Rnf148G3X9R7 316 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Igsf11P0C673 428 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Rps2P25444 293 aaKnown RBP10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Ccr1l1P51676 356 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Efnb2P52800 336 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Zfp772Q3UQL6 416 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Repin1Q5U4E2 545 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Gpr173Q6PI62 373 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 SetmarQ80UJ9 309 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 JkampQ8BI36 311 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Arf2Q8BSL7 181 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 B3gnt8Q8R3I9 389 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Chrnb4Q8R493 495 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Abhd3Q91ZH7 411 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Pop4Q9CR08 221 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Samd8Q9DA37 478 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 PacrgQ9DAK2 241 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr122W4VSP0 330 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Trav12n-2A0A075B626 113 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Gm38303A0A0A6YWW8 100 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Tex38A2A8T7 201 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Rdh16f1E9Q9P8 317 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 1700017D01RikG5E851 209 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Upk2P38575 184 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Eif5aP63242 154 aaKnown RBP10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Ctf2P83714 204 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Gm525Q3V3I5 90 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr32Q7TQZ0 308 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 MetrnQ8C1Q4 291 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Dctn4Q8CBY8 467 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Rdh9Q8K5C8 317 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Adhfe1Q8R0N6 465 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Hsd17b13Q8VCR2 304 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr1002Q8VFK2 318 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Notch4P31695 1964 aa10.14□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr225E9PWF9 419 aa10.13□□□□□ -0.79
Col9a1-202ENSMUST00000088349 P01795 144 aa10.13□□□□□ -0.79
Col9a1-202ENSMUST00000088349 ElnP54320 860 aa10.13□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Foxr2Q3UM89 302 aa10.13□□□□□ -0.79
Col9a1-202ENSMUST00000088349 A3galt2Q3V1N9 370 aa10.13□□□□□ -0.79
Col9a1-202ENSMUST00000088349 TxnipQ8BG60 397 aa10.13□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Fam169bQ8CHT6 337 aa10.13□□□□□ -0.79
Col9a1-202ENSMUST00000088349 St8sia6Q8K4T1 398 aa10.13□□□□□ -0.79
Col9a1-202ENSMUST00000088349 SccpdhQ8R127 429 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms