RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr635K7N6B1 321 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Hmgb3O54879 200 aaKnown RBP14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Rpl12P35979 165 aaKnown RBP14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Rps18P62270 152 aaKnown RBP14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tmem18Q3TUD9 140 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Trav5d-4Q5R1F6 114 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Cd300eQ8K249 196 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Vmn1r235Q8R297 328 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Znhit1Q8R331 154 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr488Q8VG02 314 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr559Q8VH14 318 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Pofut1Q91ZW2 393 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Sectm1aQ921W8 192 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Reg4Q9D8G5 157 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Zfp869Q9DC47 529 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 RbmxQ9WV02 391 aaKnown RBP14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 E030025P04RikA2A6V5 185 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Prr22F6TNE3 422 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Amy1P00687 511 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 NptnP97300 397 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Kyat3Q71RI9 455 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Zfp954Q7TNU5 416 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Pom121Q8K3Z9 1200 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Vmn1r217Q8R270 298 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 CytipQ91VY6 359 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Emc9Q9DB76 206 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm9573F7C950 1606 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Fbxw27A0A1D5RLF0 466 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Cldn34dA2AGU5 210 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Znf574Q8BY46 900 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Vmn1r19Q8R2C7 308 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Mtfp1Q9CRB8 166 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Pdzd11Q9CZG9 140 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ppp1r17Q9Z2E4 159 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 TncQ80YX1 2110 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Pcsk5Q04592 1877 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Prrt2E9PUL5 346 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Yjefn3F6W8I0 251 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Lyz2P08905 148 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Irf2P23906 349 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 SgcaP82350 387 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 AdoQ6PDY2 256 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr901Q7TRD1 311 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Sult1c1Q80VR3 304 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Mrpl22Q8BU88 206 aaKnown RBP14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Vmn1r226Q8R2A8 298 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Q91WE4 72 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Fbxo36Q9CQ24 188 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tmem33Q9CR67 247 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Lipt2Q9D009 231 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 4933407L21RikQ9D476 131 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gnpnat1Q9JK38 184 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Slc37a2Q9WU81 501 aa14.23□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm15130F6PYN5 206 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm5225J3QPL3 108 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 S1pr1O08530 382 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Mrpl23O35972 146 aaKnown RBP14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Zfp26P10076 861 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 LalbaP29752 143 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Zfp772Q3UQL6 416 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 LiphQ8CIV3 451 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr24Q8VFM9 313 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Wdr77Q99J09 342 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Lyzl6Q9DA11 148 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ergic1Q9DC16 290 aaKnown RBP14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 GlceQ9EPS3 618 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Fxyd1Q9Z239 92 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ube2ql1A0PJN4 161 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm14403A2BFU4 402 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Prr19B2RW88 366 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr248E9Q1L6 309 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tesk1O70146 627 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 HexbP20060 536 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Klk1b26P36369 261 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Q3U6N9 222 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 1810024B03RikQ8BWE1 200 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Vmn1r220Q8R272 298 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr860Q8VFF7 317 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 TirapQ99JY1 241 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm29276A0A087WNW5 222 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm20792A0A087WRF5 222 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm28490A0A087WRT9 222 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm21996A0A087WSS9 222 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm5678A0A1B0GRG8 277 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 C2cd4dP0CG09 341 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Smim37Q8BT35 56 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr1449Q8VEV8 314 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr642Q924X8 314 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Nmnat3Q99JR6 245 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Mrpl18Q9CQL5 180 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Mmp24Q9R0S2 618 aa14.22□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm2035J3QP87 144 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 CycsP62897 105 aaKnown RBP14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr145Q60882 310 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Arg1Q61176 323 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Zim1Q8C393 579 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tmem30cQ9D4D7 342 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Dkkl1Q9QZL9 230 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm12117V9GXK0 151 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr243E9PV96 316 aa14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms