RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 GATA4P43694 442 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 KCNJ3P48549 501 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 HOXA1P49639 335 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-216ENST00000641375 HLA-DRB3P79483 266 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 FGL1Q08830 312 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 SLC9A3R2Q15599 337 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 REG4Q9BYZ8 158 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 IL19Q9UHD0 177 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 TEX13DA0A0J9YY54 714 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-216ENST00000641375 MFSD2BA6NFX1 497 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 CRYM-AS1A6NIL9 109 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 SRRM5B3KS81 715 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 ZNF205O95201 554 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 CD8AP01732 235 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 RCC1P18754 421 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-216ENST00000641375 AADACP22760 399 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 PIGPP57054 158 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 HERPUD1Q15011 391 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 KDF1Q8NAX2 398 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-216ENST00000641375 PLPPR1Q8TBJ4 325 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 LRRC46Q96FV0 321 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 LINC00052Q96N35 136 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 RAB18Q9NP72 206 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 TRAPPC2LQ9UL33 140 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 KCNIP3Q9Y2W7 256 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 ATRXP46100 2492 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 POLR2GP62487 172 aaKnown RBP eCLIP13.84□□□□□ -0.19
PHGDH-216ENST00000641375 ATXN7L3Q14CW9 347 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-216ENST00000641375 FAM122AQ96E09 287 aa13.84□□□□□ -0.19
PHGDH-216ENST00000641375 WDR89Q96FK6 387 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-216ENST00000641375 NDRG3Q9UGV2 375 aa13.84□□□□□ -0.19
PHGDH-216ENST00000641375 RFPL4AA6NLU0 287 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 HMSDA8MTL9 139 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 RFPL4AL1F8VTS6 287 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 PSPNO60542 156 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 MPC2O95563 127 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 RBMXP38159 391 aaKnown RBP13.83□□□□□ -0.19
PHGDH-216ENST00000641375 TUSC1Q2TAM9 212 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 CCDC71LQ8N9Z2 235 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 OR10J5Q8NHC4 309 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 RNASE6Q93091 150 aaKnown RBP13.83□□□□□ -0.19
PHGDH-216ENST00000641375 ERGIC1Q969X5 290 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 DIRC2Q96SL1 478 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 CABLES2Q9BTV7 478 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 RSRP1Q9BUV0 290 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 SEBOXQ9HB31 216 aaPredicted RBP13.83□□□□□ -0.19
PHGDH-216ENST00000641375 SLC2A9Q9NRM0 540 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 MBNL3Q9NUK0 354 aaKnown RBP13.83□□□□□ -0.19
PHGDH-216ENST00000641375 COMMD9Q9P000 198 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 WIPI2Q9Y4P8 454 aa13.83□□□□□ -0.19
PHGDH-216ENST00000641375 TMEM30CPA0ZSE6 113 aa13.83□□□□□ -0.2
PHGDH-216ENST00000641375 CCSO14618 274 aa13.83□□□□□ -0.2
PHGDH-216ENST00000641375 IGHV1-46P01743 117 aa13.83□□□□□ -0.2
PHGDH-216ENST00000641375 C4BPBP20851 252 aa13.83□□□□□ -0.2
PHGDH-216ENST00000641375 CEBPDP49716 269 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-216ENST00000641375 TNFAIP6P98066 277 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-216ENST00000641375 CYCSP99999 105 aaKnown RBP13.83□□□□□ -0.2
PHGDH-216ENST00000641375 LGALSLQ3ZCW2 172 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-216ENST00000641375 GSG1LQ6UXU4 331 aa13.83□□□□□ -0.2
PHGDH-216ENST00000641375 MOGAT3Q86VF5 341 aa13.83□□□□□ -0.2
PHGDH-216ENST00000641375 ITLN1Q8WWA0 313 aa13.83□□□□□ -0.2
PHGDH-216ENST00000641375 RTN4IP1Q8WWV3 396 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-216ENST00000641375 VRK1Q99986 396 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-216ENST00000641375 SDHAF2Q9NX18 166 aa13.83□□□□□ -0.2
PHGDH-216ENST00000641375 TRBV6-7A0A0A0MS04 114 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 IGKV1-6A0A0C4DH72 117 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 FAM90A27PA6NNH2 459 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 TUSC2O75896 110 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 OR4A8P0C604 315 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 ADIPOQQ15848 244 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 ANKRD55Q3KP44 614 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 NCMAPQ5T1S8 102 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 SLC35E4Q6ICL7 350 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 FAM185AQ8N0U4 392 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 GALNT14Q96FL9 552 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 C5orf51A6NDU8 294 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 NPIPB11E5RHQ5 1161 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 ADAM5Q6NVV9 412 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 PCSK4Q6UW60 755 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 GCSAMQ8N6F7 178 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 ZNF565Q8N9K5 539 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 NAA60Q9H7X0 242 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 DNAJB11Q9UBS4 358 aa13.82□□□□□ -0.2
PHGDH-216ENST00000641375 ITPR1Q14643 2758 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 ICE1Q9Y2F5 2266 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 ATXN7O15265 892 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-216ENST00000641375 LHBP01229 141 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 ADH4P08319 380 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 SERPINF1P36955 418 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 COL10A1Q03692 680 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 CLRN3Q8NCR9 226 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 SEC22AQ96IW7 307 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 KIRREL1Q96J84 757 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 NMES1Q9C002 83 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 KCNIP1Q9NZI2 227 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 ADGRG4Q8IZF6 3080 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 MED19A0JLT2 244 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-216ENST00000641375 A8MXK9 166 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-216ENST00000641375 PSG2P11465 335 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms