RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 FNDC1Q4ZHG4 1894 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-223ENST00000640640 IGKV1D-43A0A0B4J1Z2 117 aa15.24■□□□□ 0.03
SCARB2-223ENST00000640640 TGOLN2O43493 480 aa15.24■□□□□ 0.03
SCARB2-223ENST00000640640 FGF2P09038 288 aa15.24■□□□□ 0.03
SCARB2-223ENST00000640640 UCP2P55851 309 aa15.24■□□□□ 0.03
SCARB2-223ENST00000640640 AESQ08117 197 aa15.24■□□□□ 0.03
SCARB2-223ENST00000640640 TMEM255AQ5JRV8 349 aa15.24■□□□□ 0.03
SCARB2-223ENST00000640640 ADTRPQ96IZ2 230 aa15.24■□□□□ 0.03
SCARB2-223ENST00000640640 RNF7Q9UBF6 113 aa15.24■□□□□ 0.03
SCARB2-223ENST00000640640 IGLV3-12A0A075B6K2 115 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 TMEM218A2RU14 115 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 OR5H1A6NKK0 313 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 SNRNP200O75643 2136 aaKnown RBP15.23■□□□□ 0.03
SCARB2-223ENST00000640640 CD3EP07766 207 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 ZNF439Q8NDP4 499 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 RPEQ96AT9 228 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 R3HDM4Q96D70 268 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 SAP30LQ9HAJ7 183 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 MGAMO43451 1857 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 ATP6V1FQ16864 119 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 ZNF528Q3MIS6 628 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 SMIM15Q7Z3B0 74 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 OPN1MWP04001 364 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 RFPL3SP0C7P2 107 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 CT45A10P0DMU9 189 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 OPN1MW2P0DN77 364 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 OPN1MW3P0DN78 364 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 P2RY6Q15077 328 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 IGSF11Q5DX21 431 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 TMEM147Q9BVK8 224 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 SLC25A22Q9H936 323 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 TMEM11P17152 192 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 F2RP25116 425 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 CSN1S1P47710 185 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 GABRA6Q16445 453 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 DBX2Q6ZNG2 339 aa15.23■□□□□ 0.03
SCARB2-223ENST00000640640 TTC28Q96AY4 2481 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 TMEM14DPA8MWL7 114 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 KIR2DS2P43631 304 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 SSTP61278 116 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 EWSR1Q01844 656 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCARB2-223ENST00000640640 ZNF154Q13106 437 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 ATP1A1-AS1Q5TC04 95 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 MRPL14Q6P1L8 145 aaKnown RBP15.22■□□□□ 0.03
SCARB2-223ENST00000640640 BSCL2Q96G97 398 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-223ENST00000640640 POMT1Q9Y6A1 747 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 CDRT15L2A8MXV6 281 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 PPIHO43447 177 aaKnown RBP15.22■□□□□ 0.03
SCARB2-223ENST00000640640 RPS11P62280 158 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCARB2-223ENST00000640640 H3F3AP84243 136 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 DEFA6Q01524 100 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 NFAM1Q8NET5 270 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-223ENST00000640640 SLC35D1Q9NTN3 355 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 MMP24Q9Y5R2 645 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 V9GYS6 101 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 C16orf97H3BN30 126 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 ACP1P24666 158 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 FGF11Q92914 225 aa15.22■□□□□ 0.03
SCARB2-223ENST00000640640 INTS1Q8N201 2190 aaKnown RBP15.21■□□□□ 0.03
SCARB2-223ENST00000640640 SOX15O60248 233 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 RPL11P62913 178 aaKnown RBP15.21■□□□□ 0.03
SCARB2-223ENST00000640640 NEIL1Q96FI4 390 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-223ENST00000640640 WNT5BQ9H1J7 359 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 FOXJ2Q9P0K8 574 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 ADRA2AP08913 450 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 OR10G4Q8NGN3 311 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 OR10G9Q8NGN4 311 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 OR10G7Q8NGN6 311 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 DTD1Q8TEA8 209 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 TMEM230Q96A57 120 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 IMMP1LQ96LU5 166 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 ATP5SQ99766 215 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 Q9N2K0 584 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 FKBP11Q9NYL4 201 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 PRR33A8MZF0 331 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 AHRRA9YTQ3 701 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 K7ESF4 209 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 LYPD3O95274 346 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 ONECUT1Q9UBC0 465 aa15.21■□□□□ 0.03
SCARB2-223ENST00000640640 PSG2P11465 335 aa15.21■□□□□ 0.02
SCARB2-223ENST00000640640 OPRK1P41145 380 aa15.21■□□□□ 0.02
SCARB2-223ENST00000640640 CDC34P49427 236 aaPredicted RBP15.21■□□□□ 0.02
SCARB2-223ENST00000640640 ZBTB34Q8NCN2 500 aa15.21■□□□□ 0.02
SCARB2-223ENST00000640640 LOC101059948A0A1B0GTJ6 334 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 TMEM50BP56557 158 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 KCNAB3O43448 404 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 ZNF883P0CG24 379 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 FAM3AP98173 230 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 LYPD8Q6UX82 237 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 TPRX1Q8N7U7 411 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 OR5B3Q8NH48 314 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 RTN4RQ9BZR6 473 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 PRDM14Q9GZV8 571 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 HSF4Q9ULV5 492 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 A0A1B0GU03 582 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 SYNGR1O43759 233 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 SCTP09683 121 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 COX7A1P24310 79 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 FGF8P55075 233 aaPredicted RBP15.2■□□□□ 0.02
SCARB2-223ENST00000640640 OR11H4Q8NGC9 324 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms