RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 COMMD9Q9P000 198 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 ANKRD11Q6UB99 2663 aaPredicted RBP9.9□□□□□ -0.83
CLN6-217ENST00000636964 hCG_38984A0A1B0GV85 526 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 EEF1E1-BLOC1S5C9J1V9 151 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 AP4M1O00189 453 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 CEACAM4O75871 244 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 NRASP01111 189 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 PMP2P02689 132 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 MT-ND4LP03901 98 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 TPT1P13693 172 aaKnown RBP9.89□□□□□ -0.83
CLN6-217ENST00000636964 CD80P33681 288 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 CAMLGP49069 296 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 NRN1LQ496H8 165 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 ZNF584Q8IVC4 421 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 ADAD2Q8NCV1 583 aaKnown RBP9.89□□□□□ -0.83
CLN6-217ENST00000636964 MRGPRDQ8TDS7 321 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 ARHGAP5-AS1Q96IT6 56 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 RPS10P5Q9NQ39 176 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 A0A0A6YYH2 397 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 A6NJ64 397 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 SIAH2O43255 324 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 CTXN2P0C2S0 81 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 RAB5AP20339 215 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 HNF4GQ14541 408 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 ZNF585AQ6P3V2 769 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 Q6ZSR3 168 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 SECTM1Q8WVN6 248 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 C1QTNF5Q9BXJ0 243 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 PRDM14Q9GZV8 571 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 GTF3C1Q12789 2109 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 PRR14LQ5THK1 2151 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 ZNF736B4DX44 427 aaPredicted RBP9.89□□□□□ -0.83
CLN6-217ENST00000636964 RAD51DO75771 328 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 LYZL6O75951 148 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 PMELP40967 661 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 CNN3Q15417 329 aaKnown RBP9.89□□□□□ -0.83
CLN6-217ENST00000636964 AWAT1Q58HT5 328 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 INO80EQ8NBZ0 244 aaPredicted RBP9.89□□□□□ -0.83
CLN6-217ENST00000636964 OR1K1Q8NGR3 316 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 SNIP1Q8TAD8 396 aaKnown RBP9.89□□□□□ -0.83
CLN6-217ENST00000636964 GMPPAQ96IJ6 420 aaPredicted RBP9.89□□□□□ -0.83
CLN6-217ENST00000636964 C20orf24Q9BUV8 137 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 PLSCR4Q9NRQ2 329 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 CRIM1Q9NZV1 1036 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 CLCF1Q9UBD9 225 aa9.89□□□□□ -0.83
CLN6-217ENST00000636964 TRBV6-7A0A0A0MS04 114 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 ARG1P05089 322 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 TAS2R19P59542 299 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 FAM24BQ8N5W8 94 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 DCUN1D4Q92564 292 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 BORCS8Q96FH0 119 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 BOD1Q96IK1 185 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 SCRT1Q9BWW7 348 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 CSTL1Q9H114 145 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 CHODLQ9H9P2 273 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 ZNF581Q9P0T4 197 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 ZNF850A8MQ14 1090 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 IL2RAP01589 272 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 GABRR1P24046 479 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 OR3A2P47893 321 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 NAAAQ02083 359 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 PLP2Q04941 152 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 SCGB2A2Q13296 93 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 PLCXD3Q63HM9 321 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 ADAM5Q6NVV9 412 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 BTNL8Q6UX41 500 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 LYG2Q86SG7 212 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 C9orf106Q8NAJ2 232 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 TMEM229BQ8NBD8 167 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 MITD1Q8WV92 249 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 HIPK2Q9H2X6 1198 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 SPTBN4Q9H254 2564 aa9.88□□□□□ -0.83
CLN6-217ENST00000636964 C7orf77A4D0Y5 90 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 A6NNC1 897 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 OR8U9P0C7N5 309 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 BLVRBP30043 206 aaPredicted RBP9.87□□□□□ -0.83
CLN6-217ENST00000636964 VWA1Q6PCB0 445 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 SHISA2Q6UWI4 295 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 MDP1Q86V88 176 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 SLC25A42Q86VD7 318 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 OR8U1Q8NH10 309 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 BCL2L2Q92843 193 aaPredicted RBP9.87□□□□□ -0.83
CLN6-217ENST00000636964 C10orf35Q96D05 121 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 YPEL4Q96NS1 127 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 SLC25A21Q9BQT8 299 aaPredicted RBP9.87□□□□□ -0.83
CLN6-217ENST00000636964 URM1Q9BTM9 101 aaKnown RBP9.87□□□□□ -0.83
CLN6-217ENST00000636964 NDUFAF3Q9BU61 184 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 SCNM1Q9BWG6 230 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 OR5AC2Q9NZP5 309 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 FBLN5Q9UBX5 448 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 XRCC2O43543 280 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 CHRM2P08172 466 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 ARR3P36575 388 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 CEACAM6P40199 344 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 FOXF2Q12947 444 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 COLCA1Q6ZS62 124 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 BPIFB2Q8N4F0 458 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 SARAFQ96BY9 339 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 POM121L2Q96KW2 1035 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 PRR13Q9NZ81 148 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms