RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RPS27AP62979 156 aaKnown RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 ZNF345Q14585 488 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 SPIN3Q5JUX0 258 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 OVCH2Q7RTZ1 564 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 MUC20Q8N307 709 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 GCDHQ92947 438 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 RBPMSQ93062 196 aaKnown RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 Q96M66 194 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 FOXC2Q99958 501 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 NICN1Q9BSH3 213 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DNTTIP1Q9H147 329 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 ATG5Q9H1Y0 275 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 ITPR3Q14573 2671 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 PRRC2AP48634 2157 aaKnown RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 IGKV1D-17A0A075B6S4 117 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 TRAV18A0A075B6X5 111 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 IGHV4-30-2A0A087WSY4 118 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 A0A1B0GW55 424 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 SH2D1BO14796 132 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DEGS1O15121 323 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 OR7C1O76099 320 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 HAND1O96004 215 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DUX4L2P0CJ85 424 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DUX4L3P0CJ86 424 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DUX4L4P0CJ87 422 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DUX4L5P0CJ88 424 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DUX4L6P0CJ89 424 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DUX4L7P0CJ90 424 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 ZNF44P15621 663 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 CPT2P23786 658 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 IL13RA2Q14627 380 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 ZNF146Q15072 292 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 FAM189A2Q15884 450 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 STUMQ69YW2 141 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 HSD17B13Q7Z5P4 300 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 SLC51BQ86UW2 128 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 KRTAP1-3Q8IUG1 177 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 CCL13Q99616 98 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 REG4Q9BYZ8 158 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 LPAR5Q9H1C0 372 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 DUX4Q9UBX2 424 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 PCDHB10Q9UN67 800 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 A0A0D9SG52 128 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 METTL21EPA6NDL7 271 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 NKX6-3A6NJ46 265 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 A8MXK9 166 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 I3L521 148 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 SIRPB1O00241 398 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 NMBP08949 121 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 SLC25A4P12235 298 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 H2BFSP57053 126 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 TMUB2Q71RG4 321 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 BIVMQ86UB2 503 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 CD177Q8N6Q3 437 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 ZDHHC22Q8N966 263 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 PRRT1Q99946 306 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 TM2D1Q9BX74 207 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 ZNF581Q9P0T4 197 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 METRNQ9UJH8 293 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 SESN1Q9Y6P5 492 aa12.05□□□□□ -0.48
LINC00339-208ENST00000634934 A0A0A6YYD4 124 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 CEACAM18A8MTB9 384 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 TMPRSS2O15393 492 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 ADAM20O43506 726 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 NDUFA2O43678 99 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 FSTL3O95633 263 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 OR2H2O95918 312 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 ZNF735P0CB33 412 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 UBE2MP61081 183 aaKnown RBP12.04□□□□□ -0.48
LINC00339-208ENST00000634934 TAGLNQ01995 201 aaKnown RBP12.04□□□□□ -0.48
LINC00339-208ENST00000634934 COL10A1Q03692 680 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 MPV17LQ2QL34 196 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 TMEM155Q4W5P6 130 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 NKAPLQ5M9Q1 402 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 Q6P435 159 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 LYPD2Q6UXB3 125 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 LINC00596Q86U02 117 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 FAM216BQ8N7L0 139 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 OR56B1Q8NGI3 324 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 OR51S1Q8NGJ8 323 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 PHYHIPLQ96FC7 376 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 SLC25A32Q9H2D1 315 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 PPA2Q9H2U2 334 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 ZNF665Q9H7R5 613 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 BEX1Q9HBH7 125 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 ANAPC10Q9UM13 185 aa12.04□□□□□ -0.48
LINC00339-208ENST00000634934 TMEM82A0PJX8 343 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 VWC2LB2RUY7 222 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 HSPB6O14558 160 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 SOCS1O15524 211 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 RAB3DO95716 219 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 CD3DP04234 171 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 CHRM2P08172 466 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 AMY2BP19961 511 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 BLVRBP30043 206 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-208ENST00000634934 UBA52P62987 128 aaKnown RBP12.03□□□□□ -0.48
LINC00339-208ENST00000634934 ATPAF1Q5TC12 328 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-208ENST00000634934 SHEQ5VZ18 495 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms