RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 AIPO00170 330 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 MRPS14O60783 128 aaKnown RBP12.67□□□□□ -0.38
LINC00339-207ENST00000634712 HTR2CP28335 458 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 GABRA5P31644 462 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 BRS3P32247 399 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 HLA-DRB5Q30154 266 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 C1orf100Q5SVJ3 147 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 ZNF497Q6ZNH5 498 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 TMEM91Q6ZNR0 172 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 WFDC12Q8WWY7 111 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 Q96M66 194 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 YTHDF1Q9BYJ9 559 aaKnown RBP12.67□□□□□ -0.38
LINC00339-207ENST00000634712 PLGRKTQ9HBL7 147 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 TRAPPC2LQ9UL33 140 aa12.67□□□□□ -0.38
LINC00339-207ENST00000634712 RRP15Q9Y3B9 282 aaKnown RBP12.67□□□□□ -0.38
LINC00339-207ENST00000634712 AMMECR1Q9Y4X0 333 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-207ENST00000634712 NPIPB11E5RHQ5 1161 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 BUB1B-PAK6H3BSN5 160 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 IGLV1-47P01700 117 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 IGHV3-7P01780 117 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 MT-ND4P03905 459 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 GLAP06280 429 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 CALRP27797 417 aaKnown RBP12.66□□□□□ -0.38
LINC00339-207ENST00000634712 SSTR5P35346 364 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 RANBP1P43487 201 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 DYNLT3P51808 116 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 EMX1Q04741 257 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-207ENST00000634712 SLC16A12Q6ZSM3 486 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 OR6M1Q8NGM8 313 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 KCNG3Q8TAE7 436 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 MMP28Q9H239 520 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 RAB9BQ9NP90 201 aa12.66□□□□□ -0.38
LINC00339-207ENST00000634712 RCC2Q9P258 522 aaKnown RBP12.66□□□□□ -0.38
LINC00339-207ENST00000634712 UBE2QL1A1L167 161 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 A6NDX4 124 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 J3QR06 171 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 ORC5O43913 435 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 CA11O75493 328 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 VSIG8P0DPA2 414 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 MNDAP41218 407 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 KIR2DS4P43632 304 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 GNG10P50151 68 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 PSMD7P51665 324 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 FABP5Q01469 135 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 NKAPLQ5M9Q1 402 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 C6orf183Q5T699 404 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 SYT6Q5T7P8 510 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-207ENST00000634712 CCDC144NLQ6NUI1 221 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 TMEM219Q86XT9 240 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 OR2T6Q8NHC8 308 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 CAPSLQ8WWF8 208 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 LEAP2Q969E1 77 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 RPEQ96AT9 228 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 TMEM59Q9BXS4 323 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 RANBP3Q9H6Z4 567 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-207ENST00000634712 FBLN5Q9UBX5 448 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 PSG11Q9UQ72 335 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 AK6Q9Y3D8 172 aaKnown RBP12.65□□□□□ -0.38
LINC00339-207ENST00000634712 FBN3Q75N90 2809 aa12.65□□□□□ -0.38
LINC00339-207ENST00000634712 SDCBPO00560 298 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-207ENST00000634712 SLC22A1O15245 554 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 SPINT2O43291 252 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 PDCD6O75340 191 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 BPNT1O95861 308 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 JUNBP17275 347 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-207ENST00000634712 PROK1P58294 105 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 SRSF4Q08170 494 aaKnown RBP12.64□□□□□ -0.39
LINC00339-207ENST00000634712 TPTE2P1Q5T6R2 138 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 OR10X1Q8NGY0 326 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 OR4K15Q8NH41 348 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 LRRC42Q9Y546 428 aa12.64□□□□□ -0.39
LINC00339-207ENST00000634712 OOSP1A8MZH6 123 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 CHST1O43916 411 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 ARSBP15848 533 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 RPS27AP62979 156 aaKnown RBP12.63□□□□□ -0.39
LINC00339-207ENST00000634712 P2RY14Q15391 338 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 RAB11BQ15907 218 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 ARSJQ5FYB0 599 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-207ENST00000634712 C11orf88Q6PI97 169 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 TRAT1Q6PIZ9 186 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 CCBE1Q6UXH8 406 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-207ENST00000634712 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 OR52M1Q8NGK5 317 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 UBALD1Q8TB05 177 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 TOMM40LQ969M1 308 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 AKR1E2Q96JD6 320 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 URM1Q9BTM9 101 aaKnown RBP12.63□□□□□ -0.39
LINC00339-207ENST00000634712 ZNF696Q9H7X3 374 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 KCNIP1Q9NZI2 227 aa12.63□□□□□ -0.39
LINC00339-207ENST00000634712 C15orf65H3BRN8 121 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 SLC17A2O00624 439 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 PDCD5O14737 125 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 CD37P11049 281 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 MYL9P24844 172 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 PSMB9P28065 219 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 MADCAM1Q13477 382 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms