RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 TNFAIP8L1Q8WVP5 186 aa10.01□□□□□ -0.81
LINC00339-206ENST00000634451 RGP1Q92546 391 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-206ENST00000634451 ST6GALNAC6Q969X2 333 aa10.01□□□□□ -0.81
LINC00339-206ENST00000634451 ORAI1Q96D31 301 aa10.01□□□□□ -0.81
LINC00339-206ENST00000634451 RITA1Q96K30 269 aa10.01□□□□□ -0.81
LINC00339-206ENST00000634451 KCTD7Q96MP8 289 aa10.01□□□□□ -0.81
LINC00339-206ENST00000634451 S1PR3Q99500 378 aa10.01□□□□□ -0.81
LINC00339-206ENST00000634451 DPCDQ9BVM2 203 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-206ENST00000634451 GABARAPL3Q9BY60 117 aa10.01□□□□□ -0.81
LINC00339-206ENST00000634451 WSB1Q9Y6I7 421 aa10.01□□□□□ -0.81
LINC00339-206ENST00000634451 LCE6AA0A183 80 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 A0A1W2PP11 408 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 DAPL1A0PJW8 107 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 TRIM64CA6NLI5 447 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 SULT1B1O43704 296 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 IGHG4P01861 327 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 GAPDHP04406 335 aaKnown RBP10□□□□□ -0.81
LINC00339-206ENST00000634451 ELANEP08246 267 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 FRMD6-AS1P0C7T7 363 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 CNTFRP26992 372 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 PSMB8P28062 276 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 C21orf33P30042 268 aaPredicted RBP10□□□□□ -0.81
LINC00339-206ENST00000634451 ELP2Q6IA86 826 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 ADAMTSL5Q6ZMM2 481 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 LHFPL3Q86UP9 236 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 SATL1Q86VE3 508 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 ZDHHC13Q8IUH4 622 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 FAM71E2Q8N5Q1 922 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 OR2T10Q8NGZ9 312 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 MYOZ3Q8TDC0 251 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 CASTOR1Q8WTX7 329 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 RTN4IP1Q8WWV3 396 aaPredicted RBP10□□□□□ -0.81
LINC00339-206ENST00000634451 FAM192AQ9GZU8 254 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 ISYNA1Q9NPH2 558 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 TAS2R4Q9NYW5 299 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 OAZ3Q9UMX2 235 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
LINC00339-206ENST00000634451 CSMD3Q7Z407 3707 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 SDCBPO00560 298 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-206ENST00000634451 ATP8B1O43520 1251 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 HTR3BO95264 441 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 SNRPBP14678 240 aaKnown RBP9.99□□□□□ -0.81
LINC00339-206ENST00000634451 SPNP16150 400 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 VHLP40337 213 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 SOX2P48431 317 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 CCR9P51686 369 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 ZNF134P52741 427 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 GP2P55259 537 aaKnown RBP9.99□□□□□ -0.81
LINC00339-206ENST00000634451 DNAL1Q4LDG9 190 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 OR10V1Q8NGI7 309 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 DCUN1D4Q92564 292 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 ARL11Q969Q4 196 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 LGALS12Q96DT0 336 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 LYSTQ99698 3801 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 BARHL1Q9BZE3 327 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 GFOD1Q9NXC2 390 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 TNCP24821 2201 aa9.99□□□□□ -0.81
LINC00339-206ENST00000634451 I3L521 148 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 GEMIN2O14893 280 aaKnown RBP9.98□□□□□ -0.81
LINC00339-206ENST00000634451 MPZL2O60487 215 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 MOSP00540 346 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 DBTP11182 482 aaKnown RBP9.98□□□□□ -0.81
LINC00339-206ENST00000634451 HOXB6P17509 224 aaKnown RBP9.98□□□□□ -0.81
LINC00339-206ENST00000634451 VDAC1P21796 283 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 GTF2A1P52655 376 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-206ENST00000634451 SLURP1P55000 103 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 IL13RA2Q14627 380 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 XAF1Q6GPH4 301 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 PARP16Q8N5Y8 322 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 ZNF439Q8NDP4 499 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 Q8NFD4 153 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 PXT1Q8NFP0 134 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 OR1N2Q8NGR9 330 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 TSEN15Q8WW01 171 aaKnown RBP9.98□□□□□ -0.81
LINC00339-206ENST00000634451 RASL11BQ9BPW5 248 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 ALG8Q9BVK2 526 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 NCOR1P1Q9H4R4 102 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 RHOFQ9HBH0 211 aa9.98□□□□□ -0.81
LINC00339-206ENST00000634451 ZMAT5Q9UDW3 170 aaKnown RBP9.98□□□□□ -0.81
LINC00339-206ENST00000634451 MAGEA13PA6NCF6 341 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 ATP6V0E1O15342 81 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 OR7C1O76099 320 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-206ENST00000634451 LYL1P12980 280 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 FASP25445 335 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 PPIFP30405 207 aaKnown RBP9.97□□□□□ -0.81
LINC00339-206ENST00000634451 SOX6P35712 828 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 NDPQ00604 133 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 PAX5Q02548 391 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 TMED1Q13445 227 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 GNMTQ14749 295 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 ZIK1Q3SY52 487 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-206ENST00000634451 KLHL22Q53GT1 634 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 CT45A1Q5HYN5 189 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 ZNF529Q6P280 563 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 LINC00311Q8N616 119 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 ZNF491Q8N8L2 437 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 OR1L1Q8NH94 360 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 CT45A3Q8NHU0 189 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 DLX4Q92988 240 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-206ENST00000634451 RFKQ969G6 155 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms