RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 IGKV1D-33P01593 117 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 IGKV1-33P01594 117 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 IGHV3-7P01780 117 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 CSTBP04080 98 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 GAPDHP04406 335 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 IGFBP3P17936 291 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 BDKRB2P30411 391 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 ZNF93P35789 620 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 THBS3P49746 956 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 GNG10P50151 68 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 ETV1P50549 477 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 KRTAP10-11P60412 298 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 PPP3R1P63098 170 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 HES1Q14469 280 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 SMN1Q16637 294 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 LTC4SQ16873 150 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 DDI2Q5TDH0 399 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 MRPL41Q8IXM3 137 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 IZUMO1Q8IYV9 350 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 Q8N6K4 173 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 SMIM19Q96E16 107 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 BABAM2Q9NXR7 383 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 ZNF581Q9P0T4 197 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 ING4Q9UNL4 249 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 SIRT4Q9Y6E7 314 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
SOX2-OT-247ENST00000628347 IGHV1-3A0A0C4DH29 117 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 TRBV5-5A0A0J9YX44 114 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 SERPINE3A8MV23 424 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 CCRL2O00421 344 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 SLC35B1P78383 322 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 OR2G6Q5TZ20 316 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 DMKNQ6E0U4 476 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 ZNF497Q6ZNH5 498 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 OR2W3Q7Z3T1 314 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 SLC35E3Q7Z769 313 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 ZNF329Q86UD4 541 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 TGIF2LXQ8IUE1 241 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 ZNF555Q8NEP9 628 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 ARL11Q969Q4 196 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 NOL4LQ96MY1 436 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 S100A13Q99584 98 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 MCRIP2Q9BUT9 160 aaKnown RBP9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 GFOD1Q9NXC2 390 aa9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 SMPD3Q9NY59 655 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 DIMT1Q9UNQ2 313 aaKnown RBP9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 EXOSC1Q9Y3B2 195 aaKnown RBP9.84□□□□□ -0.83
SOX2-OT-247ENST00000628347 TRAV39A0A0B4J263 110 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 WI2-2373I1.2A0A1W2PRP0 233 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 LALBAP00709 142 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 GTF2F2P13984 249 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 FSTP19883 344 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 SERPINA2P20848 420 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 CD1BP29016 333 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 MYCNOSP40205 109 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 ZNF137PP52743 207 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 RIPK1Q13546 671 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 GPR176Q14439 515 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 HNF4GQ14541 408 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 TMEM30BQ3MIR4 351 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 FOXRED2Q8IWF2 684 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 GAPTQ8N292 157 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 STPG2Q8N412 459 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 DPF1Q92782 380 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 ST6GALNAC6Q969X2 333 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 MRPS24Q96EL2 167 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 EAF1Q96JC9 268 aaPredicted RBP9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 ZNF184Q99676 751 aaPredicted RBP9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 SPACA1Q9HBV2 294 aa9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 LIN7CQ9NUP9 197 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 RCC2Q9P258 522 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-247ENST00000628347 A0A1W2PPE3 182 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 SDCBPO00560 298 aaPredicted RBP9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 MT-ND4P03905 459 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 MYL12AP19105 171 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 IL3RAP26951 378 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 RPS11P62280 158 aaKnown RBP eCLIP9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 MED21Q13503 144 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 Q499Y3 187 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 YIF1BQ5BJH7 314 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 ATAD3CQ5T2N8 411 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 MOB3BQ86TA1 216 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 CDH26Q8IXH8 852 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 ZNF485Q8NCK3 441 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 TMEM104Q8NE00 496 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 OR13C5Q8NGS8 318 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 OR2T10Q8NGZ9 312 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 RTN4IP1Q8WWV3 396 aaPredicted RBP9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 GHSRQ92847 366 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 ORAI1Q96D31 301 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 PGLYRP3Q96LB9 341 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 P2RX4Q99571 388 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 ABCG5Q9H222 651 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 RAB9BQ9NP90 201 aa9.82□□□□□ -0.84
SOX2-OT-247ENST00000628347 TRBV5-7A0A0A0MS05 114 aa9.81□□□□□ -0.84
SOX2-OT-247ENST00000628347 A0A1W2PP11 408 aa9.81□□□□□ -0.84
SOX2-OT-247ENST00000628347 FAM90A10PA6NDY2 464 aa9.81□□□□□ -0.84
SOX2-OT-247ENST00000628347 FAM90A7PA6NKC0 464 aa9.81□□□□□ -0.84
SOX2-OT-247ENST00000628347 FAM90A23PA8MXZ1 464 aa9.81□□□□□ -0.84
SOX2-OT-247ENST00000628347 H0YHG0 523 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms