RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 ZNF519Q8TB69 540 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 ZNF665Q9H7R5 613 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 COL18A1P39060 1754 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 ZNF785A8K8V0 405 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 RPL36A-HNRNPH2H7BZ11 118 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 P01737 135 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 FCGR3AP08637 254 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 PRSS53Q2L4Q9 553 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 ZNF343Q6P1L6 599 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 MOB3BQ86TA1 216 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 RSG1Q9BU20 258 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 TREM2Q9NZC2 230 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 SMPD2O60906 423 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 PPP1CCP36873 323 aaKnown RBP16.5■□□□□ 0.23
SPAST-203ENST00000615843 HINT1P49773 126 aaPredicted RBP16.5■□□□□ 0.23
SPAST-203ENST00000615843 OR2D3Q8NGH3 330 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 KISS1RQ969F8 398 aaPredicted RBP16.5■□□□□ 0.23
SPAST-203ENST00000615843 HSPB8Q9UJY1 196 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 OR2M5A3KFT3 312 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 CCL7P80098 99 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 SPATA45Q537H7 98 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 DHRS13Q6UX07 377 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 UNQ9370/PRO34162Q6UXP9 181 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 RARRES2Q99969 163 aa16.5■□□□□ 0.23
SPAST-203ENST00000615843 TRBV5-7A0A0A0MS05 114 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 UPK3AO75631 287 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 TRGC1P0CF51 173 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 MEF2BQ02080 365 aaPredicted RBP16.49■□□□□ 0.23
SPAST-203ENST00000615843 AQP3Q92482 292 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 CBLN4Q9NTU7 201 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 RNPS1Q15287 305 aaKnown RBP16.49■□□□□ 0.23
SPAST-203ENST00000615843 LHX8Q68G74 356 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 DTX4Q9Y2E6 619 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 A0A1W2PN81 502 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 ISLRO14498 428 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 RND3P61587 244 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 GAMTQ14353 236 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 TMEM52Q8NDY8 209 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 LOXL2Q9Y4K0 774 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 IGHV3-13P01766 116 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 IGHV3-7P01780 117 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 ASAH2BP0C7U1 165 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 LRRC29Q8WV35 223 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 TP53RKQ96S44 253 aa16.49■□□□□ 0.23
SPAST-203ENST00000615843 CARHSP1Q9Y2V2 147 aaKnown RBP16.49■□□□□ 0.23
SPAST-203ENST00000615843 TNFSF14O43557 240 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 HAND1O96004 215 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 SPINK2P20155 84 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 AMELYQ99218 206 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 ATG101Q9BSB4 218 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 SHISA3A0PJX4 238 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 CELA2BP08218 269 aaPredicted RBP16.48■□□□□ 0.23
SPAST-203ENST00000615843 C1orf100Q5SVJ3 147 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 WDR25Q64LD2 544 aaPredicted RBP16.48■□□□□ 0.23
SPAST-203ENST00000615843 WFDC8Q8IUA0 241 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 OR4A4PQ8NGN8 299 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 IGSF23A1L1A6 192 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 CORTO00230 105 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 CD8AP01732 235 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 A0A1W2PP11 408 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 RHBDL1O75783 438 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 IGKV1D-16P01601 117 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 APCDD1LQ8NCL9 501 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 OR6C3Q9NZP0 311 aa16.48■□□□□ 0.23
SPAST-203ENST00000615843 IGHV1OR21-1A0A087WYE8 117 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 RAC3P60763 192 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 ABHD14AQ9BUJ0 271 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 LNP1A1A4G5 178 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 OOEPA6NGQ2 149 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 RAB29O14966 203 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 ATRAIDQ6UW56 229 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 UQCR10Q9UDW1 63 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 DANCRP0C864 163 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 SRD5A2P31213 254 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 LINC00469Q8N7U9 141 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 ADTRPQ96IZ2 230 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 COL8A1P27658 744 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 RIGQ13278 110 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 C19orf48Q6RUI8 117 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 OR1B1Q8NGR6 318 aa16.47■□□□□ 0.23
SPAST-203ENST00000615843 PTPMT1Q8WUK0 201 aaPredicted RBP16.47■□□□□ 0.23
SPAST-203ENST00000615843 NDUFB3O43676 98 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 CD82P27701 267 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 PTCRAQ6ISU1 281 aaPredicted RBP16.46■□□□□ 0.23
SPAST-203ENST00000615843 P2RX4Q99571 388 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 PARD6GQ9BYG4 376 aaPredicted RBP16.46■□□□□ 0.23
SPAST-203ENST00000615843 MT-ND6P03923 174 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 LRRC10Q5BKY1 277 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 TMEM116Q8NCL8 245 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 GPX7Q96SL4 187 aaPredicted RBP16.46■□□□□ 0.23
SPAST-203ENST00000615843 YBX2Q9Y2T7 364 aaKnown RBP16.46■□□□□ 0.23
SPAST-203ENST00000615843 DNASE2O00115 360 aaPredicted RBP16.46■□□□□ 0.23
SPAST-203ENST00000615843 HIST1H1EP10412 219 aaKnown RBP16.46■□□□□ 0.23
SPAST-203ENST00000615843 MPLP40238 635 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 TMEM204Q9BSN7 226 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 CLN8Q9UBY8 286 aa16.46■□□□□ 0.23
SPAST-203ENST00000615843 NDUFB4O95168 129 aa16.46■□□□□ 0.22
SPAST-203ENST00000615843 ITGBL1O95965 494 aaPredicted RBP16.46■□□□□ 0.22
SPAST-203ENST00000615843 ROM1Q03395 351 aa16.46■□□□□ 0.22
SPAST-203ENST00000615843 GABRA6Q16445 453 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms