RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 J3QRK9 145 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 SLC22A1O15245 554 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 CSN2P05814 226 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 OR3A3P47888 321 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 TAS2R43P59537 309 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 MRPL30Q8TCC3 161 aaKnown RBP4.56□□□□□ -1.68
CPNE3-208ENST00000614678 S100A13Q99584 98 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 PLGRKTQ9HBL7 147 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 NDUFB11Q9NX14 153 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 OR1A1Q9P1Q5 309 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 RCC2Q9P258 522 aaKnown RBP4.56□□□□□ -1.68
CPNE3-208ENST00000614678 SESN1Q9Y6P5 492 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 LY6LH3BQJ8 138 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 BUB1B-PAK6H3BSN5 160 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 CLDN34H7C241 214 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 AIPO00170 330 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 CNTFRP26992 372 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 LGALS4P56470 323 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 PROK1P58294 105 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 BDH1Q02338 343 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 BLMHQ13867 455 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 C1QL4Q86Z23 238 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 CCDC54Q8NEL0 328 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 OR5H6Q8NGV6 325 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 TBC1D15Q8TC07 691 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 CLEC7AQ9BXN2 247 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 TXNL4BQ9NX01 149 aaKnown RBP4.56□□□□□ -1.68
CPNE3-208ENST00000614678 IL36GQ9NZH8 169 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 RNF114Q9Y508 228 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 TNCP24821 2201 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 A0A0A6YYJ9 748 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 IGKV1-6A0A0C4DH72 117 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 TMEM14DPA8MWL7 114 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 NPIPB11E5RHQ5 1161 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 TIMM23O14925 209 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 TSPAN15O95858 294 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 HBZP02008 142 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 PRB2P02812 416 aaPredicted RBP4.56□□□□□ -1.68
CPNE3-208ENST00000614678 SCTP09683 121 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 GNB3P16520 340 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 CHATP28329 748 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 ERP29P30040 261 aaKnown RBP4.56□□□□□ -1.68
CPNE3-208ENST00000614678 BLVRBP30043 206 aaPredicted RBP4.56□□□□□ -1.68
CPNE3-208ENST00000614678 GABRA5P31644 462 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 SDC2P34741 201 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 HSPA13P48723 471 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 COMPP49747 757 aaPredicted RBP4.56□□□□□ -1.68
CPNE3-208ENST00000614678 HLA-DRB5Q30154 266 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 CT45A1Q5HYN5 189 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 C1orf100Q5SVJ3 147 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 C18orf65Q6ZTR6 163 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 DRAM1Q8N682 238 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 CT45A3Q8NHU0 189 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 IL1F10Q8WWZ1 152 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 NOL4LQ96MY1 436 aaPredicted RBP4.56□□□□□ -1.68
CPNE3-208ENST00000614678 GPHA2Q96T91 129 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 MEGF9Q9H1U4 602 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 HEXA-AS1Q9H8Q6 139 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 ZNF702PQ9H963 129 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 AK3Q9UIJ7 227 aa4.56□□□□□ -1.68
CPNE3-208ENST00000614678 FOXI3A8MTJ6 420 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-208ENST00000614678 LPLP06858 475 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 VSIG10L2P0DP72 767 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 RPS27AP62979 156 aaKnown RBP4.55□□□□□ -1.68
CPNE3-208ENST00000614678 MEF2CQ06413 473 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-208ENST00000614678 MED21Q13503 144 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 ABCA11PQ4W5N1 156 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 UBE2UQ5VVX9 321 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 GLDNQ6ZMI3 551 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-208ENST00000614678 SETD6Q8TBK2 473 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 CORO2AQ92828 525 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 BARHL1Q9BZE3 327 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 LIN7BQ9HAP6 207 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 TAF9BQ9HBM6 251 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 TRAPPC2LQ9UL33 140 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 COL7A1Q02388 2944 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 A0A1W2PPI3 338 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 J3QR06 171 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 KCNAB3O43448 404 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 PROP1O75360 226 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 IL1AP01583 271 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 ARSBP15848 533 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 GUCA2AQ02747 115 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 HERPUD1Q15011 391 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 LRRC75BQ2VPJ9 315 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 NCR3LG1Q68D85 454 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 CD200R1LQ6Q8B3 271 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 MS4A15Q8N5U1 240 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 CASTOR1Q8WTX7 329 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 FAM3DQ96BQ1 224 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 TMEM59Q9BXS4 323 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 SERTAD4Q9NUC0 356 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 TCF19Q9Y242 345 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 A0A1W2PRX2 142 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 SDCBPO00560 298 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-208ENST00000614678 CD1AP06126 327 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 F2RL1P55085 397 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 IL13RA2Q14627 380 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 MIDNQ504T8 468 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 RPL39P5Q59GN2 51 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms