RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 HIST1H2BCP62807 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST2H2BEQ16778 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 IZUMO4Q1ZYL8 232 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF774Q6NX45 483 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 DMBX1Q8NFW5 382 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FRZBQ92765 325 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST1H2BHQ93079 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 BOD1Q96IK1 185 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST1H2BNQ99877 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HIST1H2BMQ99879 126 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF816-ZNF321PA0A0X1KG74 233 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 A0A1W2PNU3 283 aaPredicted RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SSSCA1O60232 199 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RPL23AP62750 156 aaKnown RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 WIPI1Q5MNZ9 446 aaPredicted RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 LRFN1Q9P244 771 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TUBD1Q9UJT1 453 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CDX4O14627 284 aaPredicted RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 IGHV2-5P01817 119 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 MBPP02686 304 aaPredicted RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RPS18P62269 152 aaKnown RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RNPS1Q15287 305 aaKnown RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 MPV17LQ2QL34 196 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TMEM211Q6ICI0 200 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 POC1AQ8NBT0 407 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 MDS2Q8NDY4 140 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 UBALD1Q8TB05 177 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GTF3AQ92664 365 aaKnown RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GALNT14Q96FL9 552 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 C1orf123Q9NWV4 160 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 IL17BQ9UHF5 180 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ANXA10Q9UJ72 324 aa9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 NOSIPQ9Y314 301 aaKnown RBP9.34□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 LNP1A1A4G5 178 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 J3QW42 95 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MSTNO14793 375 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PPIHO43447 177 aaKnown RBP9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NRASP01111 189 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CDX1P47902 265 aaPredicted RBP9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 IDH3GP51553 393 aaPredicted RBP9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MTCP1P56278 107 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TESK1Q15569 626 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CEACAM16Q2WEN9 425 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CBLN4Q9NTU7 201 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CRYM-AS1A6NIL9 109 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 A6NNC1 897 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 C3orf80F5H4A9 247 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 G3V3Y1 287 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 GDF1P27539 372 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CD82P27701 267 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ERVS71-1P61550 626 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 C10orf91Q5T1B1 145 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TMEM164Q5U3C3 297 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NEK7Q8TDX7 302 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ARRDC1-AS1Q9H2J1 176 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PARP11Q9NR21 331 aa9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MCTS1Q9ULC4 181 aaKnown RBP9.33□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 IFNA10P01566 189 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 HOXA5P20719 270 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 DCAF10Q5QP82 559 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 LINC00596Q86U02 117 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RTN4IP1Q8WWV3 396 aaPredicted RBP9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NIPSNAP3BQ9BS92 247 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR5H1A6NKK0 313 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TAAR5O14804 337 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR5H8P0DN80 308 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF25P17030 456 aaPredicted RBP9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RPL29P47914 159 aaKnown RBP9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RND3P61587 244 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 VAMP2P63027 116 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ADIRFQ15847 76 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FOXJ2Q9P0K8 574 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 KCNIP3Q9Y2W7 256 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 WNT2P09544 360 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 EDN3P14138 238 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 GNRHRP30968 328 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 GNMTQ14749 295 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF705AQ6ZN79 300 aaPredicted RBP9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR10AD1Q8NGE0 317 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR2AE1Q8NHA4 323 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PRDM13Q9H4Q3 707 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 GPR173Q9NS66 373 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NECAP2Q9NVZ3 263 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 WSB1Q9Y6I7 421 aa9.32□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF705FA8MVS1 300 aaPredicted RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SLC31A2O15432 143 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MT-CO3P00414 261 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF705DP0CH99 300 aaPredicted RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF705BP0CI00 300 aaPredicted RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF16P17020 682 aaPredicted RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ARR3P36575 388 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ELLP55199 621 aaPredicted RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 DAZAP2Q15038 168 aaPredicted RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ABHD17BQ5VST6 288 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OSR2Q8N2R0 312 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FGFBP3Q8TAT2 258 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms