RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 UPK1AO00322 258 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 RFXANKO14593 260 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 TNFSF12O43508 249 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 TYROBPO43914 113 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 GMDSO60547 372 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 EIF1BO60739 113 aaKnown RBP3.26□□□□□ -1.89
LINC00540-201ENST00000611481 SEMA3DO95025 777 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 FARS2O95363 451 aaKnown RBP3.26□□□□□ -1.89
LINC00540-201ENST00000611481 TSPAN13O95857 204 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 CST4P01036 141 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 PATE4P0C8F1 98 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 NR2C1P13056 603 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 SPNP16150 400 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 PMCHP20382 165 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 CD40LGP29965 261 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 ARHGDIBP52566 201 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 LINC01547P58512 204 aaPredicted RBP3.26□□□□□ -1.89
LINC00540-201ENST00000611481 ZNF85Q03923 595 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 SCRN3Q0VDG4 424 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 GNMTQ14749 295 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 DGUOKQ16854 277 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 TIGITQ495A1 244 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 THEM4Q5T1C6 240 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 CCNJQ5T5M9 372 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 FAM45BPQ6NSW5 357 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 Q6ZSR3 168 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 SLC25A48Q6ZT89 311 aaKnown RBP3.26□□□□□ -1.89
LINC00540-201ENST00000611481 SLC35D2Q76EJ3 337 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 PAGE2Q7Z2X7 111 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 FAM122BQ7Z309 247 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 OR2W3Q7Z3T1 314 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 ZNF584Q8IVC4 421 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 MMGT1Q8N4V1 131 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 ZNF645Q8N7E2 425 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 C19orf18Q8NEA5 215 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 OR2Z1Q8NG97 314 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 OR9Q2Q8NGE9 314 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 OR4D6Q8NGJ1 314 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 OR10G8Q8NGN5 311 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 OR52E5Q8NH55 327 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 OR5W2Q8NH69 310 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 ZNF420Q8TAQ5 688 aaPredicted RBP3.26□□□□□ -1.89
LINC00540-201ENST00000611481 FAM45AQ8TCE6 357 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 PCNPQ8WW12 178 aaKnown RBP3.26□□□□□ -1.89
LINC00540-201ENST00000611481 GTF2H4Q92759 462 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 CDKL2Q92772 493 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 TOMM40LQ969M1 308 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 SERPINI1Q99574 410 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 LINC00470Q9BZP3 86 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 BCL2L14Q9BZR8 327 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 SLC19A3Q9BZV2 496 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 CTPS2Q9NRF8 586 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 GIN1Q9NXP7 522 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 TMCO1Q9UM00 188 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 COPS3Q9UNS2 423 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 TRAPPC4Q9Y296 219 aa3.26□□□□□ -1.89
LINC00540-201ENST00000611481 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.26□□□□□ -1.89
LINC00540-201ENST00000611481 IGHV3-64DA0A0J9YX35 117 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 TCRBV9S1A1TA0A576 114 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 CENPXA8MT69 81 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 BLOC1S5-TXNDC5H3BN57 136 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 MANBAO00462 879 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 TOR1AO14656 332 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 ITGB1BP1O14713 200 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 OR7A10O76100 309 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 KCNK2O95069 426 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 UBL3O95164 117 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 AHSA1O95433 338 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 PSMG1O95456 288 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 FADS2O95864 444 aaKnown RBP3.25□□□□□ -1.89
LINC00540-201ENST00000611481 SERPINA5P05154 406 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 MPIP34949 423 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 RGS6P49758 472 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 RAB13P51153 203 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 NCBP2P52298 156 aaKnown RBP eCLIP3.25□□□□□ -1.89
LINC00540-201ENST00000611481 CRYBA2P53672 197 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 AQP5P55064 265 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 XGP55808 180 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 BASP1P80723 227 aaKnown RBP3.25□□□□□ -1.89
LINC00540-201ENST00000611481 TMEM187Q14656 261 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 DUSP7Q16829 419 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 TRIM16LQ309B1 348 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 GTDC1Q4AE62 458 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 PAN3Q58A45 887 aaKnown RBP3.25□□□□□ -1.89
LINC00540-201ENST00000611481 TMPRSS11AQ6ZMR5 421 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 ZNF600Q6ZNG1 722 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 COMMD6Q7Z4G1 85 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 SGPP2Q8IWX5 399 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 SLC7A5P1Q8MH63 180 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 OR2L13Q8N349 312 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 MTURNQ8N3F0 131 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 PIFOQ8TCI5 191 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 TCP10LQ8TDR4 215 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 TMEM234Q8WY98 164 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 MAGEB18Q96M61 343 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 ZNF382Q96SR6 550 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 RNF2Q99496 336 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 ATF6BQ99941 703 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 CABLES2Q9BTV7 478 aa3.25□□□□□ -1.89
LINC00540-201ENST00000611481 SHCBP1LQ9BZQ2 653 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms