RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 KIRREL1Q96J84 757 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 NEDD4LQ96PU5 975 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 GFI1Q99684 422 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 SSX3Q99909 188 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 VCX3AQ9NNX9 186 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 RAB18Q9NP72 206 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 ING3Q9NXR8 418 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 ETAA1Q9NY74 926 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 IDI2-AS1Q9NZ38 188 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 SSR3Q9UNL2 185 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 MMP24Q9Y5R2 645 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 STAB1Q9NY15 2570 aa11.58□□□□□ -0.56
HDDC2-209ENST00000609477 A0A087WXM4 84 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 POM121CA8CG34 1229 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 LEUTXA8MZ59 168 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 AIPO00170 330 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 TOR1AO14656 332 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 GPR137BO60478 399 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 RAB3BP20337 219 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 ARHGDIBP52566 201 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 UNC119Q13432 240 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 Q3ZCU0 254 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 C6orf183Q5T699 404 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 SIGIRRQ6IA17 410 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 FAM89BQ8N5H3 189 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 OR4P4Q8NGL7 312 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 OR4F5Q8NH21 305 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 OR9G1Q8NH87 305 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 MRGPRDQ8TDS7 321 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 ZNF581Q9P0T4 197 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 DPM3Q9P2X0 92 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 STEAP1Q9UHE8 339 aa11.57□□□□□ -0.56
HDDC2-209ENST00000609477 IFITM5A6NNB3 132 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 OOSP1A8MZH6 123 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 H3BUX3 64 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 OMGP23515 440 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 CHATP28329 748 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 HLA-DRB5Q30154 266 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 AWAT1Q58HT5 328 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 C22orf42Q6IC83 251 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 BRICD5Q6PL45 260 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 LHFPL4Q7Z7J7 247 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 C8orf31Q8N9H6 132 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 TSPAN14Q8NG11 270 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 C17orf50Q8WW18 174 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 FAM3DQ96BQ1 224 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 RIMS4Q9H426 269 aaPredicted RBP11.56□□□□□ -0.56
HDDC2-209ENST00000609477 ABCB10Q9NRK6 738 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 MBNL3Q9NUK0 354 aaKnown RBP11.56□□□□□ -0.56
HDDC2-209ENST00000609477 TXNL4BQ9NX01 149 aaKnown RBP11.56□□□□□ -0.56
HDDC2-209ENST00000609477 PITPNC1Q9UKF7 332 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 TRAPPC2LQ9UL33 140 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 HSF4Q9ULV5 492 aa11.56□□□□□ -0.56
HDDC2-209ENST00000609477 AMMECR1Q9Y4X0 333 aaPredicted RBP11.56□□□□□ -0.56
HDDC2-209ENST00000609477 C15orf65H3BRN8 121 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 BUB1B-PAK6H3BSN5 160 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 SPINT2O43291 252 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 SSX2Q16385 188 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 C2orf76Q3KRA6 126 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 TIMM50Q3ZCQ8 353 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 OR10K2Q6IF99 312 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 CCDC144NLQ6NUI1 221 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 C3orf56Q8N813 242 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 OR51D1Q8NGF3 324 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 NDNFQ8TB73 568 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 ARL11Q969Q4 196 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 PTX4Q96A99 478 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 LPAR5Q9H1C0 372 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 MMP28Q9H239 520 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 ZNF696Q9H7X3 374 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 BEX1Q9HBH7 125 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 ZNF286AQ9HBT8 521 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 TNFRSF19Q9NS68 423 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 PLEKHJ1Q9NW61 149 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 C1RLQ9NZP8 487 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 RAB22AQ9UL26 194 aa11.55□□□□□ -0.56
HDDC2-209ENST00000609477 J3QR06 171 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 F2RL2O00254 374 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 LDLRAD4O15165 306 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 TMEM127O75204 238 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 NFYBP25208 207 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 BLVRBP30043 206 aaPredicted RBP11.54□□□□□ -0.56
HDDC2-209ENST00000609477 BRS3P32247 399 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 SSTR5P35346 364 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 GDNFP39905 211 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 RAG2P55895 527 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 P2RY14Q15391 338 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 NEDD8Q15843 81 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 STEAP3Q658P3 488 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 DHRS7BQ6IAN0 325 aaPredicted RBP11.54□□□□□ -0.56
HDDC2-209ENST00000609477 OR56B1Q8NGI3 324 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 PIFOQ8TCI5 191 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 KCTD7Q96MP8 289 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 KCNIP1Q9NZI2 227 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 MGAT4AQ9UM21 535 aa11.54□□□□□ -0.56
HDDC2-209ENST00000609477 TENM1Q9UKZ4 2725 aa11.53□□□□□ -0.56
HDDC2-209ENST00000609477 SHISA3A0PJX4 238 aa11.53□□□□□ -0.56
HDDC2-209ENST00000609477 UBE2QL1A1L167 161 aa11.53□□□□□ -0.56
HDDC2-209ENST00000609477 NOTOA8MTQ0 251 aa11.53□□□□□ -0.56
HDDC2-209ENST00000609477 TSPAN9O75954 239 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms