RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 NDUFA2O43678 99 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 ENSAO43768 121 aaKnown RBP9.5□□□□□ -0.89
LINC00539-204ENST00000608957 ORC5O43913 435 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 CA11O75493 328 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 RBBP9O75884 186 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 OR7C1O76099 320 aaPredicted RBP9.5□□□□□ -0.89
LINC00539-204ENST00000608957 ECDO95905 644 aaPredicted RBP9.5□□□□□ -0.89
LINC00539-204ENST00000608957 GSTT2BP0CG30 244 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 AP3S2P59780 193 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 IKZF1Q13422 519 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 TRIM16LQ309B1 348 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 RUSC1-AS1Q66K80 236 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 OLFML2AQ68BL7 652 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 STUMQ69YW2 141 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 BRD3OSQ6XYD6 125 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 BTN2A1Q7KYR7 527 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 C6orf201Q7Z4U5 140 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 TRAPPC6BQ86SZ2 158 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 OR5T2Q8NGG2 359 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 TAF15Q92804 592 aaKnown RBP eCLIP9.5□□□□□ -0.89
LINC00539-204ENST00000608957 NEDD4LQ96PU5 975 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 C11orf54Q9H0W9 315 aaPredicted RBP9.5□□□□□ -0.89
LINC00539-204ENST00000608957 SIRPDQ9H106 197 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 HES4Q9HCC6 221 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 PLEKHJ1Q9NW61 149 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 TAS2R8Q9NYW2 309 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 ZNF581Q9P0T4 197 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 RCC2Q9P258 522 aaKnown RBP9.5□□□□□ -0.89
LINC00539-204ENST00000608957 KLK11Q9UBX7 282 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 ANKRD20A5PA0PJZ0 165 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 H3BUI4 141 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 TMPRSS2O15393 492 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 LYRM1O43325 122 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 SSX5O60225 188 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 CSF1P09603 554 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 MUC1P15941 1255 aaPredicted RBP9.49□□□□□ -0.89
LINC00539-204ENST00000608957 GLRA1P23415 457 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 RCVRNP35243 200 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 COMPP49747 757 aaPredicted RBP9.49□□□□□ -0.89
LINC00539-204ENST00000608957 DYRK1AQ13627 763 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 ARFRP1Q13795 201 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 OXA1LQ15070 435 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 MICBQ29980 383 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 SPIN3Q5JUX0 258 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 MZT2BQ6NZ67 158 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 CENPSQ8N2Z9 138 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 CYYR1Q96J86 154 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 GAFA1Q96PS6 74 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 JMJD8Q96S16 334 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 C7orf50Q9BRJ6 194 aaKnown RBP9.49□□□□□ -0.89
LINC00539-204ENST00000608957 PCGF1Q9BSM1 259 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 MS4A7Q9GZW8 240 aaPredicted RBP9.49□□□□□ -0.89
LINC00539-204ENST00000608957 IFT22Q9H7X7 185 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 SPACA1Q9HBV2 294 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 IFT46Q9NQC8 304 aa9.49□□□□□ -0.89
LINC00539-204ENST00000608957 ZNF107Q9UII5 783 aaPredicted RBP9.49□□□□□ -0.89
LINC00539-204ENST00000608957 CENPXA8MT69 81 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 FUT3P21217 361 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 PRTN3P24158 256 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 DUSP1P28562 367 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 CBX5P45973 191 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 DLX1P56177 255 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 ZNF146Q15072 292 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 PDCD1Q15116 288 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 DEFB112Q30KQ8 113 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 SMIM21Q3B7S5 101 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 ATAD3CQ5T2N8 411 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 ATPAF1Q5TC12 328 aaPredicted RBP9.48□□□□□ -0.89
LINC00539-204ENST00000608957 CD276Q5ZPR3 534 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 C12orf54Q6X4T0 127 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 ACP7Q6ZNF0 438 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 LY6G5BQ8NDX9 201 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 ANGPTL6Q8NI99 470 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 ENKURQ8TC29 256 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 DEDD2Q8WXF8 326 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 SULT4A1Q9BR01 284 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 RASL12Q9NYN1 266 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 AK3Q9UIJ7 227 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 RPUSD1Q9UJJ7 312 aaKnown RBP9.48□□□□□ -0.89
LINC00539-204ENST00000608957 ANAPC10Q9UM13 185 aa9.48□□□□□ -0.89
LINC00539-204ENST00000608957 IGKV1D-17A0A075B6S4 117 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 TOX4O94842 621 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 HAND1O96004 215 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 KNG1P01042 644 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 ZNF44P15621 663 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 FAUP35544 74 aaKnown RBP9.47□□□□□ -0.89
LINC00539-204ENST00000608957 RFX2P48378 723 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 TAS2R19P59542 299 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 ARF6P62330 175 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 MRPS15P82914 257 aaKnown RBP9.47□□□□□ -0.89
LINC00539-204ENST00000608957 PRB3Q04118 309 aaPredicted RBP9.47□□□□□ -0.89
LINC00539-204ENST00000608957 BAMBIQ13145 260 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 SLC9A3R2Q15599 337 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 Q6P435 159 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 ZNF788Q6ZQV5 615 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 GDPD3Q7L5L3 318 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 NRARPQ7Z6K4 114 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
LINC00539-204ENST00000608957 CMSS1Q9BQ75 279 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms