RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PRDX1Q06830 199 aaKnown RBP10.86□□□□□ -0.67
CTCFL-218ENST00000608440 FAM57BQ71RH2 274 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 OR11L1Q8NGX0 322 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 TMEM186Q96B77 213 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 KLHDC3Q9BQ90 382 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 RTN4RQ9BZR6 473 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 G6PC2Q9NQR9 355 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 C19orf53Q9UNZ5 99 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-218ENST00000608440 R4GMQ9 66 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 DUXBA0A1W2PPF3 345 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 IGLC7A0M8Q6 106 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 EPHA8P29322 1005 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-218ENST00000608440 DLX2Q07687 328 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-218ENST00000608440 CXorf66Q5JRM2 361 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-218ENST00000608440 OR1N2Q8NGR9 330 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 C8orf44Q96CB5 159 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 ANAPC16Q96DE5 110 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 GPER1Q99527 375 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 PECRQ9BY49 303 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 BRWD1Q9NSI6 2320 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 DOCK11Q5JSL3 2073 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 OR7C2O60412 319 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 IGKV1D-16P01601 117 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 CBLN1P23435 193 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 BLVRBP30043 206 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-218ENST00000608440 PPP1CBP62140 327 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.86□□□□□ -0.67
CTCFL-218ENST00000608440 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 MRGPRGQ86SM5 289 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 SFTPA1Q8IWL2 248 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 OR2A1Q8NGT9 310 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 PHF3Q92576 2039 aaKnown RBP10.85□□□□□ -0.67
CTCFL-218ENST00000608440 TRAV1-1A0A0B4J248 108 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 SERPINE3A8MV23 424 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 MSTNO14793 375 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 CT62P0C5K7 136 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 PMCHP20382 165 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 SCGB2A2Q13296 93 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 NSDHLQ15738 373 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 EXT1Q16394 746 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 ODF3L1Q8IXM7 274 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 SELENOHQ8IZQ5 122 aaKnown RBP10.85□□□□□ -0.67
CTCFL-218ENST00000608440 KLHDC1Q8N7A1 406 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 C18orf12Q96KH6 178 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 MRPS16Q9Y3D3 137 aaKnown RBP10.85□□□□□ -0.67
CTCFL-218ENST00000608440 TBL2Q9Y4P3 447 aaKnown RBP10.85□□□□□ -0.67
CTCFL-218ENST00000608440 ARHGAP21Q5T5U3 1957 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 TRIOBPQ9H2D6 2365 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 TMEM50AO95807 157 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 CTSSP25774 331 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 MEF2BQ02080 365 aaPredicted RBP10.85□□□□□ -0.67
CTCFL-218ENST00000608440 ROM1Q03395 351 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 RBPJQ06330 500 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 DEFB134Q4QY38 66 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 COMMD2Q86X83 199 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 TCTEX1D1Q8N7M0 179 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 UHRF2Q96PU4 802 aa10.85□□□□□ -0.67
CTCFL-218ENST00000608440 TAX1BP3O14907 124 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 TOX4O94842 621 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF728P0DKX0 622 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 CD99P14209 185 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 LCN2P80188 198 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 CD226Q15762 336 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF440Q8IYI8 595 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 FAM89BQ8N5H3 189 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 OR4F5Q8NH21 305 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 OR52N5Q8NH56 324 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 MRPL30Q8TCC3 161 aaKnown RBP10.84□□□□□ -0.67
CTCFL-218ENST00000608440 GATAD1Q8WUU5 269 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 OR4F4Q96R69 305 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF576Q9H609 170 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 CLEC1BQ9P126 229 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 IGHV2-26A0A0B4J1V2 119 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 PRRT4C9JH25 899 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 LATO43561 262 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 CISD3P0C7P0 127 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 ERGP11308 486 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 CTLA4P16410 223 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 AMTP48728 403 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 LHX2P50458 406 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 PRRX1P54821 245 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 RRADP55042 308 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 GAB4Q2WGN9 574 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 CHRDL2Q6WN34 429 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 OR5D14Q8NGL3 314 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 PLA2G2FQ9BZM2 168 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF286AQ9HBT8 521 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 MMP25Q9NPA2 562 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
CTCFL-218ENST00000608440 FREM3P0C091 2139 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 OR6C6A6NF89 314 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 GJE1A6NN92 205 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 ZNF850A8MQ14 1090 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 FAM166BA8MTA8 275 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 NPIPB7O75200 414 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 ADH1BP00325 375 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 IFNA1P01562 189 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 WNT2P09544 360 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 ZNF133P52736 654 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms