RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 BAG2O95816 211 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 CLIC3O95833 236 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 LALBAP00709 142 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 IGHG2P01859 326 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 MT-ND4P03905 459 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 GAPDHP04406 335 aaKnown RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 IGFBP3P17936 291 aaPredicted RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 SERPINA2P20848 420 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 THBS3P49746 956 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 RPL23AP62750 156 aaKnown RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 EGFEM1PQ0D2K5 195 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 ZNF816Q0VGE8 651 aaPredicted RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 MPV17LQ2QL34 196 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 SLC22A6Q4U2R8 563 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 ATAD3CQ5T2N8 411 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 DMKNQ6E0U4 476 aaPredicted RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 FAM53AQ6NSI3 398 aaPredicted RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 ETV3LQ6ZN32 361 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 MOB3BQ86TA1 216 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 LINC00596Q86U02 117 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 MRPL41Q8IXM3 137 aaKnown RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 LINC00311Q8N616 119 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 LINC00482Q8N8I6 264 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 ZNF555Q8NEP9 628 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 OR52M1Q8NGK5 317 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 OR13C5Q8NGS8 318 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 CCDC107Q8WV48 283 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 ARL11Q969Q4 196 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 SMIM19Q96E16 107 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 RDH12Q96NR8 316 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 S100A13Q99584 98 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 ZNF184Q99676 751 aaPredicted RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 ZFP57Q9NU63 452 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 SMPD3Q9NY59 655 aaPredicted RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 CLEC2DQ9UHP7 191 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 LINC00527Q9UJ94 153 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 DIMT1Q9UNQ2 313 aaKnown RBP6.02□□□□□ -1.45
CUX1-219ENST00000606749 TRAV8-7A0A075B6U6 113 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 IGHV3-72A0A0B4J1Y9 119 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 A0A1W2PP11 408 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 WI2-2373I1.2A0A1W2PRP0 233 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 IRGMA1A4Y4 181 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 MAGEA13PA6NCF6 341 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 NCBP2LA6PVI3 153 aaKnown RBP6.01□□□□□ -1.45
CUX1-219ENST00000606749 SERPINE3A8MV23 424 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 CCRL2O00421 344 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 SDCBPO00560 298 aaPredicted RBP6.01□□□□□ -1.45
CUX1-219ENST00000606749 HSD17B6O14756 317 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 ZNF780AO75290 641 aaPredicted RBP6.01□□□□□ -1.45
CUX1-219ENST00000606749 GTF2F2P13984 249 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 MYL12AP19105 171 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 REG1BP48304 166 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 RPS11P62280 158 aaKnown RBP eCLIP6.01□□□□□ -1.45
CUX1-219ENST00000606749 RIPK1Q13546 671 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 GPR176Q14439 515 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 YIF1BQ5BJH7 314 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 DEFB121Q5J5C9 76 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 ZNF497Q6ZNH5 498 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 C18orf65Q6ZTR6 163 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 OR2W3Q7Z3T1 314 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 SLC35E3Q7Z769 313 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 STPG2Q8N412 459 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 Q8N6K4 173 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 C8orf31Q8N9H6 132 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 Q8N9W7 124 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 ZNF485Q8NCK3 441 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 OR51D1Q8NGF3 324 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 UBALD1Q8TB05 177 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 GGHQ92820 318 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 ST6GALNAC6Q969X2 333 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 TMEM80Q96HE8 168 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 EAF1Q96JC9 268 aaPredicted RBP6.01□□□□□ -1.45
CUX1-219ENST00000606749 PLSCR3Q9NRY6 295 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 GFOD1Q9NXC2 390 aa6.01□□□□□ -1.45
CUX1-219ENST00000606749 EXOSC1Q9Y3B2 195 aaKnown RBP6.01□□□□□ -1.45
CUX1-219ENST00000606749 TRBV5-7A0A0A0MS05 114 aa6□□□□□ -1.45
CUX1-219ENST00000606749 IGHV3-43A0A0B4J1X8 118 aa6□□□□□ -1.45
CUX1-219ENST00000606749 A0A1W2PPK0 400 aa6□□□□□ -1.45
CUX1-219ENST00000606749 ZNF736B4DX44 427 aaPredicted RBP6□□□□□ -1.45
CUX1-219ENST00000606749 MCRIP1C9JLW8 97 aa6□□□□□ -1.45
CUX1-219ENST00000606749 AIPO00170 330 aa6□□□□□ -1.45
CUX1-219ENST00000606749 IGHV3-43DP0DP04 118 aa6□□□□□ -1.45
CUX1-219ENST00000606749 CD1BP29016 333 aa6□□□□□ -1.45
CUX1-219ENST00000606749 SLC6A1P30531 599 aa6□□□□□ -1.45
CUX1-219ENST00000606749 HOXD3P31249 432 aaPredicted RBP6□□□□□ -1.45
CUX1-219ENST00000606749 MYCNOSP40205 109 aa6□□□□□ -1.45
CUX1-219ENST00000606749 ZNF134P52741 427 aa6□□□□□ -1.45
CUX1-219ENST00000606749 SLC35B1P78383 322 aa6□□□□□ -1.45
CUX1-219ENST00000606749 ST3GAL4Q11206 333 aa6□□□□□ -1.45
CUX1-219ENST00000606749 LRRC36Q1X8D7 754 aa6□□□□□ -1.45
CUX1-219ENST00000606749 Q3ZCU0 254 aa6□□□□□ -1.45
CUX1-219ENST00000606749 Q499Y3 187 aa6□□□□□ -1.45
CUX1-219ENST00000606749 SYT6Q5T7P8 510 aaPredicted RBP6□□□□□ -1.45
CUX1-219ENST00000606749 TTC23Q5W5X9 447 aa6□□□□□ -1.45
CUX1-219ENST00000606749 TEX38Q6PEX7 206 aa6□□□□□ -1.45
CUX1-219ENST00000606749 GLIPR1L1Q6UWM5 242 aa6□□□□□ -1.45
CUX1-219ENST00000606749 C8orf86Q6ZUL3 223 aa6□□□□□ -1.45
CUX1-219ENST00000606749 TGIF2LXQ8IUE1 241 aa6□□□□□ -1.45
CUX1-219ENST00000606749 FOXRED2Q8IWF2 684 aa6□□□□□ -1.45
CUX1-219ENST00000606749 CDH26Q8IXH8 852 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms