RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 TMEM54Q969K7 222 aa13.19□□□□□ -0.3
FGFR2-222ENST00000604236 CLCC1Q96S66 551 aa13.19□□□□□ -0.3
FGFR2-222ENST00000604236 UQCC1Q9NVA1 299 aa13.19□□□□□ -0.3
FGFR2-222ENST00000604236 SEMA5BQ9P283 1151 aa13.19□□□□□ -0.3
FGFR2-222ENST00000604236 FOXD3Q9UJU5 478 aaPredicted RBP13.19□□□□□ -0.3
FGFR2-222ENST00000604236 CSMD1Q96PZ7 3565 aa13.19□□□□□ -0.3
FGFR2-222ENST00000604236 LOC390937A0A1W2PQ73 354 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 DYNLT3P51808 116 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 FOXO1Q12778 655 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 FAM189A2Q15884 450 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 MPV17LQ2QL34 196 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 OSGIN2Q9Y236 505 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 CUBNO60494 3623 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 MSTNO14793 375 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 MPPED1O15442 326 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 IFNA17P01571 189 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 CST2P09228 141 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 RAB11AP62491 216 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 ACTBL2Q562R1 376 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 ZNF529Q6P280 563 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 TCTEX1D2Q8WW35 142 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 FER1L6-AS2Q96M78 137 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 ALX4Q9H161 411 aaPredicted RBP13.18□□□□□ -0.3
FGFR2-222ENST00000604236 RAB18Q9NP72 206 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 TTLL8A6PVC2 850 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
FGFR2-222ENST00000604236 LPCAT3Q6P1A2 487 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 HPSE2Q8WWQ2 592 aa13.18□□□□□ -0.3
FGFR2-222ENST00000604236 APOBEC3DQ96AK3 386 aaPredicted RBP13.18□□□□□ -0.3
FGFR2-222ENST00000604236 A0A0U1RQV5 110 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 hCG_38984A0A1B0GV85 526 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 LOC105371267A0A1B0GV96 52 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 OR5H1A6NKK0 313 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 UMAD1C9J7I0 102 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 SHOXO15266 292 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 IGHV3-48P01763 117 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 SELLP14151 372 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 COL8A2P25067 703 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 NKX6-1P78426 367 aaPredicted RBP13.17□□□□□ -0.3
FGFR2-222ENST00000604236 ZNF273Q14593 569 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 PNLIPRP3Q17RR3 467 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 CCDC71LQ8N9Z2 235 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 PIGMQ9H3S5 423 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 GCH1P30793 250 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 LHX2P50458 406 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 F2RL1P55085 397 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 UBE2G2P60604 165 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 SSTP61278 116 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 SNRPEP62304 92 aaKnown RBP13.17□□□□□ -0.3
FGFR2-222ENST00000604236 CCL20P78556 96 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 OR4A4PQ8NGN8 299 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 OR1L1Q8NH94 360 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 SCGB1C1Q8TD33 95 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 GFOD1Q9NXC2 390 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 ABCA2Q9BZC7 2435 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 LOC102723996A0A087X1L8 192 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 ST8SIA5O15466 376 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 CD37P11049 281 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 CD59P13987 128 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 G6PCP35575 357 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 GNG10P50151 68 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 DHODHQ02127 395 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 GTF3AQ92664 365 aaKnown RBP13.17□□□□□ -0.3
FGFR2-222ENST00000604236 EDARQ9UNE0 448 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 PSG11Q9UQ72 335 aa13.17□□□□□ -0.3
FGFR2-222ENST00000604236 A0A1W2PPH5 198 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 CEBPZOSA8MTT3 80 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 SSTR5P35346 364 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 TBC1D28Q2M2D7 210 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 WFDC1Q9HC57 220 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 SCAF4O95104 1147 aaKnown RBP13.16□□□□□ -0.3
FGFR2-222ENST00000604236 MMP9P14780 707 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 EGR1P18146 543 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
FGFR2-222ENST00000604236 MPV17P39210 176 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 CLDN18P56856 261 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 PPP1CBP62140 327 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 SPRR3Q9UBC9 169 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 WNT5AP41221 380 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 SLC16A13Q7RTY0 426 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 OR2D2Q9H210 308 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 FAM212BQ9NTI7 297 aaPredicted RBP13.16□□□□□ -0.3
FGFR2-222ENST00000604236 LPAR3Q9UBY5 353 aa13.16□□□□□ -0.3
FGFR2-222ENST00000604236 USP9XQ93008 2570 aaPredicted RBP13.15□□□□□ -0.3
FGFR2-222ENST00000604236 UBE2L5PA0A1B0GUS4 154 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 HEXAP06865 529 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 NAT2P11245 290 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 TRA2AQ13595 282 aaKnown RBP eCLIP13.15□□□□□ -0.3
FGFR2-222ENST00000604236 GUK1Q16774 197 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 VAX1Q5SQQ9 334 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 WBP1Q96G27 269 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 KLF13Q9Y2Y9 288 aaPredicted RBP13.15□□□□□ -0.3
FGFR2-222ENST00000604236 CPAMD8Q8IZJ3 1885 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 CD55P08174 381 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 FGF2P09038 288 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 ADCYAP1P18509 176 aa13.15□□□□□ -0.3
FGFR2-222ENST00000604236 MRPL49Q13405 166 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms