RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 SPINT2O43291 252 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 RRP9O43818 475 aaKnown RBP15.7■□□□□ 0.1
UPF1-212ENST00000601689 ORC5O43913 435 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 NDUFA7O95182 113 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 VSIG8P0DPA2 414 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 CD34P28906 385 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 BRS3P32247 399 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 SSX1Q16384 188 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 C17orf58Q2M2W7 97 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 NKAPLQ5M9Q1 402 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 CCDC144NLQ6NUI1 221 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 BRICD5Q6PL45 260 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 ZNF497Q6ZNH5 498 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 ARL11Q969Q4 196 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 HILPDAQ9Y5L2 63 aa15.7■□□□□ 0.1
UPF1-212ENST00000601689 A0A087X0M5 115 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 A0A1B0GX30 115 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 VGLL3A8MV65 326 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 F2RL2O00254 374 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 MMP23AO75900 390 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 MNDAP41218 407 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 RPS27AP62979 156 aaKnown RBP15.69■□□□□ 0.1
UPF1-212ENST00000601689 LTC4SQ16873 150 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 TMEM30BQ3MIR4 351 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 CD200R1LQ6Q8B3 271 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 CCDC107Q8WV48 283 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 C17orf50Q8WW18 174 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 KIRREL1Q96J84 757 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 PLEKHJ1Q9NW61 149 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 C1RLQ9NZP8 487 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 STUB1Q9UNE7 303 aa15.69■□□□□ 0.1
UPF1-212ENST00000601689 FAM172BPA6NC97 362 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 NPIPB11E5RHQ5 1161 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 TNFAIP8O95379 198 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 MT-ND4P03905 459 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 CD37P11049 281 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 RAB3BP20337 219 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 CFPP27918 469 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 LY6EQ16553 131 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 PLA1AQ53H76 456 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 SYT6Q5T7P8 510 aaPredicted RBP15.68■□□□□ 0.1
UPF1-212ENST00000601689 RFESDQ8TAC1 157 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 CAPSLQ8WWF8 208 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 TM2D1Q9BX74 207 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 LINC00574Q9H8X3 128 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 STEAP1Q9UHE8 339 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 MMP24Q9Y5R2 645 aa15.68■□□□□ 0.1
UPF1-212ENST00000601689 UBE2QL1A1L167 161 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 TMEM14DPA8MWL7 114 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 OOSP1A8MZH6 123 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 CGB3P0DN86 165 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 CGB7P0DN87 165 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 BLVRBP30043 206 aaPredicted RBP15.67■□□□□ 0.1
UPF1-212ENST00000601689 SSTR5P35346 364 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 P2RY14Q15391 338 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 HLA-DRB5Q30154 266 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 C22orf42Q6IC83 251 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 OR10K2Q6IF99 312 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 SHISA2Q6UWI4 295 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 OR52M1Q8NGK5 317 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 OR4P4Q8NGL7 312 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 OR10X1Q8NGY0 326 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 RPEQ96AT9 228 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 FAM3DQ96BQ1 224 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 MMP28Q9H239 520 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 ZNF286AQ9HBT8 521 aa15.67■□□□□ 0.1
UPF1-212ENST00000601689 A0A087WXM4 84 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 CLPSL1A2RUU4 121 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 BUB1B-PAK6H3BSN5 160 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 J3QR06 171 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 SDCBPO00560 298 aaPredicted RBP15.66■□□□□ 0.1
UPF1-212ENST00000601689 LPLP06858 475 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 IL3RAP26951 378 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 FGF9P31371 208 aaPredicted RBP15.66■□□□□ 0.1
UPF1-212ENST00000601689 DYNLT3P51808 116 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 NEDD8Q15843 81 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 OLFML2AQ68BL7 652 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 ZNF554Q86TJ5 538 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 OR51D1Q8NGF3 324 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 OR4C13Q8NGP0 309 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 OR4K15Q8NH41 348 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 AKR1E2Q96JD6 320 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 ZNF747Q9BV97 191 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 NPFFR1Q9GZQ6 430 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 RIMS4Q9H426 269 aaPredicted RBP15.66■□□□□ 0.1
UPF1-212ENST00000601689 CHMP1AQ9HD42 196 aaPredicted RBP15.66■□□□□ 0.1
UPF1-212ENST00000601689 ZNF581Q9P0T4 197 aa15.66■□□□□ 0.1
UPF1-212ENST00000601689 TRAV39A0A0B4J263 110 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 IGLV1-47P01700 117 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 MDKP21741 143 aaPredicted RBP15.65■□□□□ 0.1
UPF1-212ENST00000601689 MRPS15P82914 257 aaKnown RBP15.65■□□□□ 0.1
UPF1-212ENST00000601689 MADCAM1Q13477 382 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 C2orf76Q3KRA6 126 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 TIMM50Q3ZCQ8 353 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 HES5Q5TA89 166 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 TPRA1Q86W33 373 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 PRR18Q8N4B5 295 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 OR56B1Q8NGI3 324 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 AJUBAQ96IF1 538 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 GNG12Q9UBI6 72 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms