RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948		J3QR06	171 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	CRTAP	O75718	401 aa	Predicted RBP	12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	IGHV3-7	P01780	117 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	MT-ND4	P03905	459 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	FAM90A15P	P0C7V4	464 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	FAM90A13P	P0C7W8	464 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	FAM90A14P	P0C7W9	464 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	FAM90A24P	P0C7X0	464 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	HSMCR30	P0CW71	290 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	GZMH	P20718	246 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	CEACAM3	P40198	252 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	MAP2K4	P45985	399 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	RPS25	P62851	125 aa	Known RBP	12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	RBM39	Q14498	530 aa	Known RBP	12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	HABP2	Q14520	560 aa	Predicted RBP	12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	LTC4S	Q16873	150 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	HSD17B12	Q53GQ0	312 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	FBLN7	Q53RD9	439 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	RBM48	Q5RL73	367 aa	Known RBP	12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	C1orf100	Q5SVJ3	147 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	KLHDC1	Q8N7A1	406 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	DTX3	Q8N9I9	347 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	CYYR1	Q96J86	154 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	CCDC90B	Q9GZT6	254 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	GHRL	Q9UBU3	117 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	RAB26	Q9ULW5	256 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	PSG11	Q9UQ72	335 aa		12.42	□□□□□ -0.42
PLD3-223	ENST00000600948	OOSP1	A8MZH6	123 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	MCRIP1	C9JLW8	97 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948		M0QZ24	198 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	CD37	P11049	281 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	SRM	P19623	302 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	CD24	P25063	80 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	BRS3	P32247	399 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	VHL	P40337	213 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	MLLT11	Q13015	90 aa	Predicted RBP	12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	GLT8D1	Q68CQ7	371 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	SIGIRR	Q6IA17	410 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	RAB12	Q6IQ22	244 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	TMEM91	Q6ZNR0	172 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	SLC16A12	Q6ZSM3	486 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	GAPT	Q8N292	157 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	CCDC107	Q8WV48	283 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	TMEM203	Q969S6	136 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	FAM46B	Q96A09	425 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	SERTAD4	Q9NUC0	356 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	ETAA1	Q9NY74	926 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	PEX16	Q9Y5Y5	336 aa		12.41	□□□□□ -0.42
PLD3-223	ENST00000600948	AIP	O00170	330 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	ORC5	O43913	435 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	GLA	P06280	429 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	UBB	P0CG47	229 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	CPE	P16870	476 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	FUT3	P21217	361 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	GNG10	P50151	68 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	ARHGDIB	P52566	201 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	HERPUD1	Q15011	391 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	TBCE	Q15813	527 aa	Predicted RBP	12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	CCDC144NL	Q6NUI1	221 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948		Q6ZS46	218 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	UBALD1	Q8TB05	177 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	ARL11	Q969Q4	196 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	MGLL	Q99685	303 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	PRSS22	Q9GZN4	317 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	CST11	Q9H112	138 aa		12.4	□□□□□ -0.42
PLD3-223	ENST00000600948	SLC22A1	O15245	554 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	PDCD6	O75340	191 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	MPIG6B	O95866	241 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	VSIG10L2	P0DP72	767 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	VSIG8	P0DPA2	414 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	PSMA1	P25786	263 aa	Known RBP	12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	MNDA	P41218	407 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	BLCAP	P62952	87 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	TRAM1	Q15629	374 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	OR10K2	Q6IF99	312 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	C16orf82	Q7Z2V1	217 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	OR52M1	Q8NGK5	317 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	OR4K15	Q8NH41	348 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	CFHR4	Q92496	578 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	TOMM40L	Q969M1	308 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	RPE	Q96AT9	228 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	GFI1	Q99684	422 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	LIN7B	Q9HAP6	207 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	GFOD1	Q9NXC2	390 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948	BLOC1S6	Q9UL45	172 aa		12.39	□□□□□ -0.43
PLD3-223	ENST00000600948		A0A1W2PPE3	182 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948		A0A1W2PPI3	338 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	UBE2QL1	A1L167	161 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	C12orf77	C9JDV5	145 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948		H3BUI4	141 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	CA11	O75493	328 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	TSPAN15	O95858	294 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	HTR2C	P28335	458 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	LOXL3	P58215	753 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	QRFP	P83859	136 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	MADCAM1	Q13477	382 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	DIAPH2-AS1	Q14236	149 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	SYT6	Q5T7P8	510 aa	Predicted RBP	12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	FAM53A	Q6NSI3	398 aa	Predicted RBP	12.38	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms