RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 MBD3L1Q8WWY6 194 aa8.52□□□□□ -1.05
NFKB1-212ENST00000600343 BANF2Q9H503 90 aa8.52□□□□□ -1.05
NFKB1-212ENST00000600343 PELI2Q9HAT8 420 aa8.52□□□□□ -1.05
NFKB1-212ENST00000600343 K7EQM0 130 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 IFNA5P01569 189 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
NFKB1-212ENST00000600343 FLT3LGP49771 235 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 CLDN17P56750 224 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 PLP1P60201 277 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 TSPO2Q5TGU0 170 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 CDCP2Q5VXM1 449 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 SGMS2Q8NHU3 365 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 LRRC61Q9BV99 259 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 NKX2-4Q9H2Z4 354 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 PLXNA2O75051 1894 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 TRAV9-2A0A087WT02 112 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 TMEM14DPA8MWL7 114 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 TMEM250H0YL14 139 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 ZNF154Q13106 437 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 ZNF726P1Q15940 193 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 KIAA1644Q3SXP7 199 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 Q6ZVL8 140 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 KCNG3Q8TAE7 436 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 RTN4IP1Q8WWV3 396 aaPredicted RBP8.51□□□□□ -1.05
NFKB1-212ENST00000600343 BORCS7Q96B45 105 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 SPSB1Q96BD6 273 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 PECRQ9BY49 303 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 VSIRQ9H7M9 311 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 RENP00797 406 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 FMODQ06828 376 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 Q0VG73 95 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 SRSF7Q16629 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
NFKB1-212ENST00000600343 HLA-BQ31612 363 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 SLC18B1Q6NT16 456 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 OR4F5Q8NH21 305 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 C18orf12Q96KH6 178 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 SCN2AQ99250 2005 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 RARRES3Q9UL19 164 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 NKX2-6A6NCS4 301 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 C17orf112F2Z3M2 114 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 SLC33A1O00400 549 aaPredicted RBP8.51□□□□□ -1.05
NFKB1-212ENST00000600343 TMEM50BP56557 158 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 FOXL1Q12952 345 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 KIF26BQ2KJY2 2108 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 DCAF4L2Q8NA75 395 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 DOK4Q8TEW6 326 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 SUSD3Q96L08 255 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
NFKB1-212ENST00000600343 ZNF286AQ9HBT8 521 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 EMC9Q9Y3B6 208 aa8.51□□□□□ -1.05
NFKB1-212ENST00000600343 CD5LO43866 347 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 S1PR2O95136 353 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 CRYGCP07315 174 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 ERGP11308 486 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 PSMB3P49720 205 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.5□□□□□ -1.05
NFKB1-212ENST00000600343 NBPF12Q5TAG4 269 aaPredicted RBP8.5□□□□□ -1.05
NFKB1-212ENST00000600343 GLIPR1L1Q6UWM5 242 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 C12orf54Q6X4T0 127 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 OR10V1Q8NGI7 309 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 NRTNQ99748 197 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 ZFYVE21Q9BQ24 234 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 SSBP4Q9BWG4 385 aaPredicted RBP8.5□□□□□ -1.05
NFKB1-212ENST00000600343 TMEM59Q9BXS4 323 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 GEMIN7Q9H840 131 aaKnown RBP8.5□□□□□ -1.05
NFKB1-212ENST00000600343 VENTXO95231 258 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 HIST1H1TP22492 207 aaPredicted RBP8.5□□□□□ -1.05
NFKB1-212ENST00000600343 ALG10Q5BKT4 473 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 LCN12Q6JVE5 192 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 KCTD18Q6PI47 426 aaPredicted RBP8.5□□□□□ -1.05
NFKB1-212ENST00000600343 NEGR1Q7Z3B1 354 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 ST6GALNAC6Q969X2 333 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 GPX7Q96SL4 187 aaPredicted RBP8.5□□□□□ -1.05
NFKB1-212ENST00000600343 RTN4RQ9BZR6 473 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 NPVFQ9HCQ7 196 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 CES1P1Q9UKY3 287 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 SIRPB1O00241 398 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 IGLL1P15814 213 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 RAB30Q15771 203 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 HLA-DRB5Q30154 266 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 PHLDA2Q53GA4 152 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 ABHD17CQ6PCB6 329 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 HSD11B1LQ7Z5J1 315 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 TSTD1Q8NFU3 115 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 LHX4Q969G2 390 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 KCNS1Q96KK3 526 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 MOB1AQ9H8S9 216 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 PLEKHJ1Q9NW61 149 aa8.5□□□□□ -1.05
NFKB1-212ENST00000600343 ARID1BQ8NFD5 2236 aaPredicted RBP8.49□□□□□ -1.05
NFKB1-212ENST00000600343 SPAARA0A1B0GVQ0 90 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 LINC01553A4QN01 128 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 C2orf72A6NCS6 295 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 SHISA7A6NL88 538 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 KIAA1324LA8MWY0 1029 aaPredicted RBP8.49□□□□□ -1.05
NFKB1-212ENST00000600343 CLEC3BP05452 202 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 POU2F2P09086 479 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 ZNF776Q68DI1 518 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms