RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 TMEM95Q3KNT9 176 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 TPTE2P1Q5T6R2 138 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 LIPKQ5VXJ0 399 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 LHFPL3Q86UP9 236 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 CROCCP3Q8IVE0 287 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 PARP16Q8N5Y8 322 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 OR6Q1Q8NGQ2 317 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 MRAPQ8TCY5 172 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 S100ZQ8WXG8 99 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 BORCS5Q969J3 196 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 RPEQ96AT9 228 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 GPER1Q99527 375 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 OCSTAMPQ9BR26 566 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 BARHL1Q9BZE3 327 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 ZNF286AQ9HBT8 521 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 SSR3Q9UNL2 185 aa9.16□□□□□ -0.94
HIF3A-217ENST00000600236 TSSC4Q9Y5U2 329 aaPredicted RBP9.16□□□□□ -0.94
HIF3A-217ENST00000600236 WNK1Q9H4A3 2382 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 A0A075B6Q4 140 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 LOC100506127A0A0U1RQW1 187 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 KBTBD11-OT1A0A1B0GTJ5 212 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 TRDV1A0A1B0GX56 115 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 A0A1W2PRX2 142 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 TCRBV4S1A1TA0A5B7 111 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 FAM172BPA6NC97 362 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 BUB1B-PAK6H3BSN5 160 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 IL1AP01583 271 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 CD1AP06126 327 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 CD2P06729 351 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 FAM106CPP0CH98 169 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 NFYBP25208 207 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 GLP1RP43220 463 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 OR3A4PP47883 348 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 KCNJ3P48549 501 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 ZP1P60852 638 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 CD83Q01151 205 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 IL13RA2Q14627 380 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 ABCA11PQ4W5N1 156 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 PAN3Q58A45 887 aaKnown RBP9.15□□□□□ -0.94
HIF3A-217ENST00000600236 OXLD1Q5BKU9 147 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 ELP2Q6IA86 826 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 Q6P435 159 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 Q6ZS46 218 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 PXT1Q8NFP0 134 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 OR9G1Q8NH87 305 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 TOMM40LQ969M1 308 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 COQ2Q96H96 371 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 RBM14Q96PK6 669 aaKnown RBP9.15□□□□□ -0.94
HIF3A-217ENST00000600236 BABAM2Q9NXR7 383 aa9.15□□□□□ -0.94
HIF3A-217ENST00000600236 MEIKINA0A087WXM9 373 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 ADARB2-AS1A8MUL3 147 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 HSPB6O14558 160 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 ZFPL1O95159 310 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 PRB2P02812 416 aaPredicted RBP9.14□□□□□ -0.95
HIF3A-217ENST00000600236 LPLP06858 475 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 CD24P25063 80 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 TGFBR1P36897 503 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 LOXL3P58215 753 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 RPS25P62851 125 aaKnown RBP9.14□□□□□ -0.95
HIF3A-217ENST00000600236 ZNF846Q147U1 533 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 RSU1Q15404 277 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 TRAM1Q15629 374 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 C17orf58Q2M2W7 97 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 KHDC1LQ5JSQ8 128 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 C9orf152Q5JTZ5 239 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 BAIAP2L2Q6UXY1 529 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 MFSD4AQ8N468 514 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 OR51T1Q8NGJ9 327 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 MCFD2Q8NI22 146 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 TNFAIP8L1Q8WVP5 186 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 PHF21AQ96BD5 680 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 S100A13Q99584 98 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 PDCD1LG2Q9BQ51 273 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 WDR12Q9GZL7 423 aaKnown RBP9.14□□□□□ -0.95
HIF3A-217ENST00000600236 NCOR1P1Q9H4R4 102 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 ISG20L2Q9H9L3 353 aaKnown RBP9.14□□□□□ -0.95
HIF3A-217ENST00000600236 TXNL4BQ9NX01 149 aaKnown RBP9.14□□□□□ -0.95
HIF3A-217ENST00000600236 MOB4Q9Y3A3 225 aa9.14□□□□□ -0.95
HIF3A-217ENST00000600236 DUS4LO95620 317 aaKnown RBP9.13□□□□□ -0.95
HIF3A-217ENST00000600236 SOX6P35712 828 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 GDNFP39905 211 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 PPP3R1P63098 170 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 CDK5R1Q15078 307 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 Q6ZPA2 131 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 THNSL2Q86YJ6 484 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 WFDC9Q8NEX5 89 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 OR10A7Q8NGE5 316 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 KIRREL1Q96J84 757 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 KCTD7Q96MP8 289 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 PPIL3Q9H2H8 161 aaKnown RBP9.13□□□□□ -0.95
HIF3A-217ENST00000600236 RNF167Q9H6Y7 350 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 CALYQ9NYX4 217 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 IDI2-AS1Q9NZ38 188 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 KIF25Q9UIL4 384 aa9.13□□□□□ -0.95
HIF3A-217ENST00000600236 LY6LH3BQJ8 138 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 J3QR06 171 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 GABRPO00591 440 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 OGG1O15527 345 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 CSTBP04080 98 aaKnown RBP9.12□□□□□ -0.95
HIF3A-217ENST00000600236 CELP19835 753 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms