RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 LPCAT4Q643R3 524 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 ZNF529Q6P280 563 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 ASCL4Q6XD76 172 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 Q8N9W7 124 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 TSEN15Q8WW01 171 aaKnown RBP16.61■□□□□ 0.25
PNKP-212ENST00000599454 LGALS12Q96DT0 336 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 A0A1W2PPE3 182 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 SAC3D1A6NKF1 404 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 C3orf84H3BNL1 204 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 NHLRC3Q5JS37 347 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 LCNL1Q6ZST4 164 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 LHFPL3Q86UP9 236 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 SATL1Q86VE3 508 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 SUMF2Q8NBJ7 301 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 OR8H1Q8NGG4 311 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 FAM192AQ9GZU8 254 aa16.6■□□□□ 0.25
PNKP-212ENST00000599454 TMEM30CPA0ZSE6 113 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 HTR3BO95264 441 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 MOSP00540 346 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 ALPLP05186 524 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 CD1BP29016 333 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 REG1BP48304 166 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 DEFB136Q30KP8 78 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 Q3ZCU0 254 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 KLHL22Q53GT1 634 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 NKAPLQ5M9Q1 402 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 LINC00596Q86U02 117 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 PRR25Q96S07 402 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 RASL11BQ9BPW5 248 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 PDCD1LG2Q9BQ51 273 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 IL36GQ9NZH8 169 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 ZNF580Q9UK33 172 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 ST3GAL6Q9Y274 331 aa16.59■□□□□ 0.25
PNKP-212ENST00000599454 IGHV3-72A0A0B4J1Y9 119 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 SEC14L6B5MCN3 397 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 TXNL1O43396 289 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 FADS2O95864 444 aaKnown RBP16.58■□□□□ 0.24
PNKP-212ENST00000599454 ECI1P42126 302 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 TMEM104Q8NE00 496 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 OR10K1Q8NGX5 313 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 C4orf3Q8WVX3 66 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 RTN4IP1Q8WWV3 396 aaPredicted RBP16.58■□□□□ 0.24
PNKP-212ENST00000599454 ARL11Q969Q4 196 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 ST6GALNAC6Q969X2 333 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 S1PR3Q99500 378 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 ISG20L2Q9H9L3 353 aaKnown RBP16.58■□□□□ 0.24
PNKP-212ENST00000599454 PLSCR3Q9NRY6 295 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 GFOD1Q9NXC2 390 aa16.58■□□□□ 0.24
PNKP-212ENST00000599454 TRAV39A0A0B4J263 110 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 C15orf65H3BRN8 121 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 SDCBPO00560 298 aaPredicted RBP16.57■□□□□ 0.24
PNKP-212ENST00000599454 ORC5O43913 435 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 OR7C1O76099 320 aaPredicted RBP16.57■□□□□ 0.24
PNKP-212ENST00000599454 IGHG4P01861 327 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 CD2P06729 351 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 VDAC1P21796 283 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 GBX2P52951 348 aaPredicted RBP16.57■□□□□ 0.24
PNKP-212ENST00000599454 RBM11P57052 281 aaKnown RBP16.57■□□□□ 0.24
PNKP-212ENST00000599454 CFHR3Q02985 330 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 OR51A2Q8NGJ7 313 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 JAM3Q9BX67 310 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 METTL9Q9H1A3 318 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 SCOCQ9UIL1 159 aa16.57■□□□□ 0.24
PNKP-212ENST00000599454 OR5H8P0DN80 308 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 CHATP28329 748 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 FHL3Q13643 280 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 MPV17LQ2QL34 196 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 OR52N1Q8NH53 320 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 Q96MT0 163 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 CHCHD6Q9BRQ6 235 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 RAB9BQ9NP90 201 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 PAK1IP1Q9NWT1 392 aaPredicted RBP16.56■□□□□ 0.24
PNKP-212ENST00000599454 ERVK13-1Q9NX77 482 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 TAS2R4Q9NYW5 299 aa16.56■□□□□ 0.24
PNKP-212ENST00000599454 E9PI62 339 aa16.55■□□□□ 0.24
PNKP-212ENST00000599454 ATP5HO75947 161 aa16.55■□□□□ 0.24
PNKP-212ENST00000599454 CSTBP04080 98 aaKnown RBP16.55■□□□□ 0.24
PNKP-212ENST00000599454 GABRB1P18505 474 aa16.55■□□□□ 0.24
PNKP-212ENST00000599454 SOX6P35712 828 aa16.55■□□□□ 0.24
PNKP-212ENST00000599454 INSL3P51460 131 aa16.55■□□□□ 0.24
PNKP-212ENST00000599454 TMEM30BQ3MIR4 351 aa16.55■□□□□ 0.24
PNKP-212ENST00000599454 FAM71E2Q8N5Q1 922 aa16.55■□□□□ 0.24
PNKP-212ENST00000599454 S100A13Q99584 98 aa16.55■□□□□ 0.24
PNKP-212ENST00000599454 ZNF256Q9Y2P7 627 aaPredicted RBP16.55■□□□□ 0.24
PNKP-212ENST00000599454 EI24O14681 340 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 ZNF780AO75290 641 aaPredicted RBP16.54■□□□□ 0.24
PNKP-212ENST00000599454 CDRT1O95170 752 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 IGF1P05019 195 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 PSMB8P28062 276 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 SOX2P48431 317 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 ALDH3A2P51648 485 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 ZNF137PP52743 207 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 RAB40BQ12829 278 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 ZIK1Q3SY52 487 aaPredicted RBP16.54■□□□□ 0.24
PNKP-212ENST00000599454 GPR148Q8TDV2 347 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 TMEM138Q9NPI0 162 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 ZNF581Q9P0T4 197 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 ING4Q9UNL4 249 aa16.54■□□□□ 0.24
PNKP-212ENST00000599454 GEMIN2O14893 280 aaKnown RBP16.53■□□□□ 0.24
PNKP-212ENST00000599454 CIB2O75838 187 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms