RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 TRAPPC6BQ86SZ2 158 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 OR5D14Q8NGL3 314 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 UBALD1Q8TB05 177 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 NDNFQ8TB73 568 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 RAB2BQ8WUD1 216 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 TNFAIP8L1Q8WVP5 186 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 UFD1Q92890 307 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 ISYNA1Q9NPH2 558 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 NBEAL2Q6ZNJ1 2754 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 TRGV10A0A0A0MS01 117 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 TRBV5-7A0A0A0MS05 114 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 A0A1W2PPE3 182 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A18PA6NE21 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A16PA6NEW6 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A20PA6NIJ5 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A9PA6NNJ1 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A12PA8MX19 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A5PA8MXJ8 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 C15orf65H3BRN8 121 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 F2RL2O00254 374 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 GABARAPO95166 117 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A15PP0C7V4 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A13PP0C7W8 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A14PP0C7W9 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 FAM90A24PP0C7X0 464 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 RAB3AP20336 220 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 SSTR5P35346 364 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 TGFBR1P36897 503 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 PTGFRP43088 359 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 MTNR1BP49286 362 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 NCS1P62166 190 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 RPS25P62851 125 aaKnown RBP8.34□□□□□ -1.07
LIG1-213ENST00000596672 CD83Q01151 205 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 TPBGQ13641 420 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 INSL4Q14641 139 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 SPCS2Q15005 226 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 RPL22L1Q6P5R6 122 aaKnown RBP8.34□□□□□ -1.07
LIG1-213ENST00000596672 DRAXINQ8NBI3 349 aaPredicted RBP8.34□□□□□ -1.07
LIG1-213ENST00000596672 SUMF2Q8NBJ7 301 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 TSEN15Q8WW01 171 aaKnown RBP8.34□□□□□ -1.07
LIG1-213ENST00000596672 GHSRQ92847 366 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 TMEM203Q969S6 136 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 TMEM106AQ96A25 262 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 MRPL48Q96GC5 212 aaKnown RBP8.34□□□□□ -1.07
LIG1-213ENST00000596672 CHCHD6Q9BRQ6 235 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 DCUN1D5Q9BTE7 237 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 PRSS22Q9GZN4 317 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 RAB18Q9NP72 206 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 CALYQ9NYX4 217 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 PSG11Q9UQ72 335 aa8.34□□□□□ -1.07
LIG1-213ENST00000596672 A0A1W2PPI3 338 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 A0A1W2PPK0 400 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 LINC01548A6NM66 108 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 ZNF729A6NN14 1252 aaPredicted RBP8.33□□□□□ -1.08
LIG1-213ENST00000596672 GEMIN2O14893 280 aaKnown RBP8.33□□□□□ -1.08
LIG1-213ENST00000596672 FBXO24O75426 580 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 GPX5O75715 221 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 HTR3BO95264 441 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 ALDOBP05062 364 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 CELP19835 753 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 NFYBP25208 207 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 PAX5Q02548 391 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 LTC4SQ16873 150 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 PAN3Q58A45 887 aaKnown RBP8.33□□□□□ -1.08
LIG1-213ENST00000596672 RTN4RL2Q86UN3 420 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 CHST4Q8NCG5 386 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 MRGPRDQ8TDS7 321 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 GPR148Q8TDV2 347 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 SMIM19Q96E16 107 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 CENPOQ9BU64 300 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 TMED9Q9BVK6 235 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 RNF167Q9H6Y7 350 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 RHOFQ9HBH0 211 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 PLGRKTQ9HBL7 147 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 ABCB10Q9NRK6 738 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 NDUFB11Q9NX14 153 aa8.33□□□□□ -1.08
LIG1-213ENST00000596672 RYR3Q15413 4870 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 MEIKINA0A087WXM9 373 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 A0A1W2PRX2 142 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 J3QR06 171 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 IL1AP01583 271 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 LPLP06858 475 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 PSMA1P25786 263 aaKnown RBP8.32□□□□□ -1.08
LIG1-213ENST00000596672 GLP1RP43220 463 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 RBM11P57052 281 aaKnown RBP8.32□□□□□ -1.08
LIG1-213ENST00000596672 IL13RA2Q14627 380 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 CCDC58Q4VC31 144 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 ABCA11PQ4W5N1 156 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 NHLRC3Q5JS37 347 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 SIGIRRQ6IA17 410 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 C11orf88Q6PI97 169 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 Q6ZPA2 131 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 C18orf65Q6ZTR6 163 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 OR5AU1Q8NGC0 362 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 RBM14Q96PK6 669 aaKnown RBP8.32□□□□□ -1.08
LIG1-213ENST00000596672 BCL7BQ9BQE9 202 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 SLC25A33Q9BSK2 321 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 DPCDQ9BVM2 203 aaPredicted RBP8.32□□□□□ -1.08
LIG1-213ENST00000596672 GAL3ST2Q9H3Q3 398 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 NCOR1P1Q9H4R4 102 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms