RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 PSMD7P51665 324 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 RBM39Q14498 530 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 MIDNQ504T8 468 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 PLA1AQ53H76 456 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 ZNF626Q68DY1 528 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 LDLRAD3Q86YD5 345 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 OR11H6Q8NGC7 330 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 KIRREL1Q96J84 757 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 KCTD7Q96MP8 289 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 FAAP24Q9BTP7 215 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 CLEC7AQ9BXN2 247 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 NCOR1P1Q9H4R4 102 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 LIN7BQ9HAP6 207 aa11.19□□□□□ -0.62
SHKBP1-207ENST00000595631 PAHP00439 452 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 IL1AP01583 271 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 RNASE1P07998 156 aaKnown RBP11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 BLVRBP30043 206 aaPredicted RBP11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 IER3P46695 156 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 VEGFCP49767 419 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 LGALS4P56470 323 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 LSM3P62310 102 aaKnown RBP11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 FAM53AQ6NSI3 398 aaPredicted RBP11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 ZNF565Q8N9K5 539 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 NEDD4LQ96PU5 975 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 URM1Q9BTM9 101 aaKnown RBP11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 CHIAQ9BZP6 476 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 IDI2-AS1Q9NZ38 188 aa11.18□□□□□ -0.62
SHKBP1-207ENST00000595631 FOXI3A8MTJ6 420 aaPredicted RBP11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 NOTOA8MTQ0 251 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 NPIPB11E5RHQ5 1161 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 C15orf65H3BRN8 121 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 CLDN34H7C241 214 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 AIREO43918 545 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 RCC1P18754 421 aaPredicted RBP11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 CFPP27918 469 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 MOGAT2Q3SYC2 334 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 Q6ZPA2 131 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 TPRA1Q86W33 373 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 GAPTQ8N292 157 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 ABHD12Q8N2K0 398 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 BEND2Q8NDZ0 799 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 OR4P4Q8NGL7 312 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 MRPL30Q8TCC3 161 aaKnown RBP11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 ARL11Q969Q4 196 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 FBLN5Q9UBX5 448 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 DAPK2Q9UIK4 370 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 TRAPPC2LQ9UL33 140 aa11.17□□□□□ -0.62
SHKBP1-207ENST00000595631 IGHV3-43A0A0B4J1X8 118 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 GLAP06280 429 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 IGHV3-43DP0DP04 118 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 CD34P28906 385 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 TMEM50BP56557 158 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 ACTG1P63261 375 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 SSX2Q16385 188 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 PLAC9Q5JTB6 97 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 OLFML2AQ68BL7 652 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 OR52W1Q6IF63 320 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 SFXN4Q6P4A7 337 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 OR1L1Q8NH94 360 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 ZFAND2BQ8WV99 257 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 SSMEM1Q8WWF3 244 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 ARHGAP5-AS1Q96IT6 56 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 SSX3Q99909 188 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 LINC00574Q9H8X3 128 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 PLEKHJ1Q9NW61 149 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 AK3Q9UIJ7 227 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 RAB22AQ9UL26 194 aa11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 TBL2Q9Y4P3 447 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-207ENST00000595631 A0A087X0M5 115 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 A0A1B0GX30 115 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 A0A1W2PPE3 182 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 H3BUX3 64 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 IGLV1-47P01700 117 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 GNG10P50151 68 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 LY6EQ16553 131 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 PRR18Q8N4B5 295 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 OR13F1Q8NGS4 319 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 NDNFQ8TB73 568 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 FUNDC2Q9BWH2 189 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 PECRQ9BY49 303 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 MEGF9Q9H1U4 602 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 ZMAT3Q9HA38 289 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 POMT1Q9Y6A1 747 aa11.15□□□□□ -0.62
SHKBP1-207ENST00000595631 FAM181BA6NEQ2 426 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 SDCBPO00560 298 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 TOR1AO14656 332 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 ORC5O43913 435 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 GPR137BO60478 399 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 CA11O75493 328 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 HBZP02008 142 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 GZMHP20718 246 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 RAB13P51153 203 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms