RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 IGHV2-70P01814 119 aa13.12□□□□□ -0.31
ZNF541-205ENST00000595558 ERVFRD-1P60508 538 aa13.12□□□□□ -0.31
ZNF541-205ENST00000595558 ICAM4Q14773 271 aa13.12□□□□□ -0.31
ZNF541-205ENST00000595558 CPT1CQ8TCG5 803 aa13.12□□□□□ -0.31
ZNF541-205ENST00000595558 IL36GQ9NZH8 169 aa13.12□□□□□ -0.31
ZNF541-205ENST00000595558 ZNF816-ZNF321PA0A0X1KG74 233 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 SLC22A20A6NK97 555 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 MAGEA5P43359 124 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 DLK1P80370 383 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 TRA2AQ13595 282 aaKnown RBP eCLIP13.11□□□□□ -0.31
ZNF541-205ENST00000595558 ZNF266Q14584 549 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 LFNGQ8NES3 379 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 SF3B5Q9BWJ5 86 aaKnown RBP13.11□□□□□ -0.31
ZNF541-205ENST00000595558 CALHM2Q9HA72 323 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 TINAGQ9UJW2 476 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 TGIF2-C20orf24A0A0A6YYL0 155 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 A0A1B0GW64 132 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 RPL36A-HNRNPH2H7BZ11 118 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 WISP2O76076 250 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 HAAOP46952 286 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 GPM6AP51674 278 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 NDUFA6P56556 154 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 C20orf204Q6ZNR8 217 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 OR56B2PQ8NGI1 322 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 GGACTQ9BVM4 153 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 GPR35Q9HC97 309 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 OTOGLQ3ZCN5 2332 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 RELNP78509 3460 aa13.11□□□□□ -0.31
ZNF541-205ENST00000595558 NEURL1O76050 574 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 HLA-HP01893 362 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 SRD5A2P31213 254 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 PAX9P55771 341 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 UBE2KP61086 200 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 RAB1AP62820 205 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 VAMP2P63027 116 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 ELOBQ15370 118 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 SP5Q6BEB4 398 aaPredicted RBP13.1□□□□□ -0.31
ZNF541-205ENST00000595558 ZNF429Q86V71 674 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 MYPOPQ86VE0 399 aaPredicted RBP13.1□□□□□ -0.31
ZNF541-205ENST00000595558 SGCZQ96LD1 299 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 ZMAT5Q9UDW3 170 aaKnown RBP13.1□□□□□ -0.31
ZNF541-205ENST00000595558 SCAF4O95104 1147 aaKnown RBP13.1□□□□□ -0.31
ZNF541-205ENST00000595558 IFNA17P01571 189 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 ACP1P24666 158 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 MAS1LP35410 378 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 SPNS3Q6ZMD2 512 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 Q9N2K0 584 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 TAAR3PQ9P1P4 343 aa13.1□□□□□ -0.31
ZNF541-205ENST00000595558 IGHV3-64DA0A0J9YX35 117 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 YKT6O15498 198 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 MMP7P09237 267 aaPredicted RBP13.09□□□□□ -0.31
ZNF541-205ENST00000595558 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 TUSC5Q8IXB3 177 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 OR2V1Q8NHB1 315 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 CPNE4Q96A23 557 aaPredicted RBP13.09□□□□□ -0.31
ZNF541-205ENST00000595558 ADGRG7Q96K78 797 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 MTCH1Q9NZJ7 389 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 PTPRZ1P23471 2315 aaPredicted RBP13.09□□□□□ -0.31
ZNF541-205ENST00000595558 TK1P04183 234 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 ID3Q02535 119 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 SRSF6Q13247 344 aaKnown RBP13.09□□□□□ -0.31
ZNF541-205ENST00000595558 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 PDZD11Q5EBL8 140 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 PYY3Q5JQD4 70 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 ZNF295-AS1Q8N0V1 137 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 IL22RA1Q8N6P7 574 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 NEK7Q8TDX7 302 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 TCEAL7Q9BRU2 100 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 DOK5Q9P104 306 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 KIAA1456Q9P272 454 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 GJE1A6NN92 205 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 CDX4O14627 284 aaPredicted RBP13.09□□□□□ -0.31
ZNF541-205ENST00000595558 TMEM267Q0VDI3 215 aaPredicted RBP13.09□□□□□ -0.31
ZNF541-205ENST00000595558 SSPNQ14714 243 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 C1QL4Q86Z23 238 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 PRRG4Q9BZD6 226 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 TOLLIPQ9H0E2 274 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 TMPRSS5Q9H3S3 457 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 WSB1Q9Y6I7 421 aa13.09□□□□□ -0.31
ZNF541-205ENST00000595558 ZNF292O60281 2723 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 KALRNO60229 2985 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 NAPSAO96009 420 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 CYC1P08574 325 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 HOXA5P20719 270 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 S100PP25815 95 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 PRDX4Q13162 271 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 C9orf152Q5JTZ5 239 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 C17orf78Q8N4C9 275 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 CLDND2Q8NHS1 167 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 VSIRQ9H7M9 311 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 RNF115Q9Y4L5 304 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 SYNGR1O43759 233 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 SLC34A2O95436 690 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 SP9P0CG40 484 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 GFRA1P56159 465 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 TMPRSS7Q7RTY8 843 aa13.08□□□□□ -0.32
ZNF541-205ENST00000595558 THNSL2Q86YJ6 484 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms