RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 H3BUA1 57 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 RFXANKO14593 260 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 CDC42EP2O14613 210 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 TSPAN4O14817 238 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 AHCYL1O43865 530 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 TYROBPO43914 113 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 CA2P00918 260 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 IL1AP01583 271 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 IGHV3-23P01764 117 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 SPART-AS1P0CW21 52 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 MYL2P10916 166 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 TNFRSF1BP20333 461 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 UFM1P61960 85 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 EMX2Q04743 252 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 CLINT1Q14677 625 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 RGNQ15493 299 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 SLC36A3Q495N2 470 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 KRBOX4Q5JUW0 171 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 FAM222AQ5U5X8 452 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 SLX4IPQ5VYV7 408 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 METTL21CQ5VZV1 264 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 LEMD1Q68G75 181 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 FAM131AQ6UXB0 335 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 OAFQ86UD1 273 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 NPBQ8NG41 125 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 OR5A2Q8NGI9 324 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 CIRBP-AS1Q8TBR5 109 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 MRGPRDQ8TDS7 321 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 RASSF5Q8WWW0 418 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.05□□□□□ -2.08
VRK3-204ENST00000593912 BPIFA2Q96DR5 249 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 PBKQ96KB5 322 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 PAFAH2Q99487 392 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 NIPSNAP3BQ9BS92 247 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 MRPL20Q9BYC9 149 aaKnown RBP2.05□□□□□ -2.08
VRK3-204ENST00000593912 OR10A2Q9H208 303 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 REEP1Q9H902 201 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 AKIP1Q9NQ31 210 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 RPRD1BQ9NQG5 326 aaKnown RBP2.05□□□□□ -2.08
VRK3-204ENST00000593912 AIG1Q9NVV5 245 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 RBFOX1Q9NWB1 397 aaKnown RBP2.05□□□□□ -2.08
VRK3-204ENST00000593912 COA4Q9NYJ1 87 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 CORO2BQ9UQ03 480 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 DHDHQ9UQ10 334 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 POLDIP2Q9Y2S7 368 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 MED31Q9Y3C7 131 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 S4R3C0 116 aa2.05□□□□□ -2.08
VRK3-204ENST00000593912 IGKV3-7A0A075B6H7 116 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 TRBV5-7A0A0A0MS05 114 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 IGHV3-35A0A0C4DH35 117 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 PQLC2LA1A4F0 135 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 OR4C46A6NHA9 309 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 A6NIN4 97 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 A8MWP6 167 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 EFCAB9A8MZ26 197 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 ZNF878C9JN71 531 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 ZNF593O00488 134 aaPredicted RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 HSPB6O14558 160 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 GGCTO75223 188 aaKnown RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 ENTPD6O75354 484 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 ANP32DO95626 131 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 OR2H2O95918 312 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 C1QBP02746 253 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 CSTBP04080 98 aaKnown RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 CTSDP07339 412 aaPredicted RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 HOXA5P20719 270 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 CD247P20963 164 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 CFL1P23528 166 aaKnown RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 MPZP25189 248 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 HSD11B1P28845 292 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 CRABP1P29762 137 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 PYCR1P32322 319 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 RBM34P42696 430 aaKnown RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 GRB2P62993 217 aaKnown RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 SSBP2P81877 361 aaPredicted RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 RHOGP84095 191 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 CDK6Q00534 326 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 DR1Q01658 176 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 SCN1BQ07699 218 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 PIN1Q13526 163 aaPredicted RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 SCARB2Q14108 478 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 SNCBQ16143 134 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 LRIF1Q5T3J3 769 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 REEP3Q6NUK4 255 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 DNM1P34Q6PK57 102 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 ZNF573Q86YE8 665 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 NRMQ8IXM6 262 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 LILRB2Q8N423 598 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 CSNK1G2-AS1Q8NCQ2 148 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 OR51L1Q8NGJ5 315 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 OR4C15Q8NGM1 316 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 FAM81AQ8TBF8 368 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 RNF141Q8WVD5 230 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 ZNRF4Q8WWF5 429 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 GIMAP1Q8WWP7 306 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 USMG5Q96IX5 58 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 CEP19Q96LK0 163 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 NMNAT3Q96T66 252 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms