RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 TNFRSF13BO14836 293 aaPredicted RBP11.22□□□□□ -0.61
VMP1-217ENST00000593168 CTXN2P0C2S0 81 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 GSTT2P0CG29 244 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 COL8A2P25067 703 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 ATXN7L3Q14CW9 347 aaPredicted RBP11.22□□□□□ -0.61
VMP1-217ENST00000593168 Q5PR19 223 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 C20orf204Q6ZNR8 217 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 IDO2Q6ZQW0 420 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 ASCC1Q8N9N2 400 aaKnown RBP11.22□□□□□ -0.61
VMP1-217ENST00000593168 DEFB108BQ8NET1 73 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 OR13C8Q8NGS7 320 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 TERB2Q8NHR7 220 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 MYOZ1Q9NP98 299 aaPredicted RBP11.22□□□□□ -0.61
VMP1-217ENST00000593168 NUDT15Q9NV35 164 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 NECAP2Q9NVZ3 263 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 EHFQ9NZC4 300 aa11.22□□□□□ -0.61
VMP1-217ENST00000593168 DSCAMO60469 2012 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 ZANQ9Y493 2812 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 TRAV6A0A075B6T7 132 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 NKX6-3A6NJ46 265 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 SIGLEC5O15389 551 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 FABP7O15540 132 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 NDUFA2O43678 99 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 RP2O75695 350 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 ZNF205O95201 554 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 DHFRP00374 187 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 GYPAP02724 150 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 TFF1P04155 84 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 TK1P04183 234 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 H2AFB2P0C5Z0 115 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 MECP2P51608 486 aaKnown RBP11.21□□□□□ -0.61
VMP1-217ENST00000593168 TSPAN5P62079 268 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 AESQ08117 197 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 KCNJ8Q15842 424 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 KRBOX4Q5JUW0 171 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 DHRS11Q6UWP2 260 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 ZNF554Q86TJ5 538 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 LHFPL1Q86WI0 220 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 OR6F1Q8NGZ6 308 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 COQ2Q96H96 371 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 MED30Q96HR3 178 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 GAFA1Q96PS6 74 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 GINS4Q9BRT9 223 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 C20orf85Q9H1P6 137 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 TRAPPC2LQ9UL33 140 aa11.21□□□□□ -0.61
VMP1-217ENST00000593168 hCG_2014768A0A024R1R8 64 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 FUOMA2VDF0 154 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 CEACAM18A8MTB9 384 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 OVOL3O00110 214 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 SDCBPO00560 298 aaPredicted RBP11.2□□□□□ -0.62
VMP1-217ENST00000593168 SMAD7O15105 426 aaKnown RBP11.2□□□□□ -0.62
VMP1-217ENST00000593168 PEX14O75381 377 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 SCTP09683 121 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 OR5H8P0DN80 308 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 RCC1P18754 421 aaPredicted RBP11.2□□□□□ -0.62
VMP1-217ENST00000593168 ERP29P30040 261 aaKnown RBP11.2□□□□□ -0.62
VMP1-217ENST00000593168 IL13RA1P78552 427 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 HLA-DRB3P79483 266 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 HMGN3Q15651 99 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 SCGB2B2Q4G0G5 96 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 ZNF660Q6AZW8 331 aaPredicted RBP11.2□□□□□ -0.62
VMP1-217ENST00000593168 SLC36A1Q7Z2H8 476 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 PEG10Q86TG7 708 aaKnown RBP11.2□□□□□ -0.62
VMP1-217ENST00000593168 ZDHHC22Q8N966 263 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 ZNRF1Q8ND25 227 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 OR4A4PQ8NGN8 299 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 SPATA3Q8NHX4 192 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 CCDC107Q8WV48 283 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 GIMAP1Q8WWP7 306 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 IGFBPL1Q8WX77 278 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 SCGB3A2Q96PL1 93 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 CCL13Q99616 98 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 KAAG1Q9UBP8 84 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 KIF25Q9UIL4 384 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
VMP1-217ENST00000593168 ANK3Q12955 4377 aaKnown RBP11.19□□□□□ -0.62
VMP1-217ENST00000593168 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 MEIKINA0A087WXM9 373 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 INAFM1C9JVW0 142 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 ARPC1BO15143 372 aaKnown RBP11.19□□□□□ -0.62
VMP1-217ENST00000593168 DIRAS3O95661 229 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 F12P00748 615 aaPredicted RBP11.19□□□□□ -0.62
VMP1-217ENST00000593168 DAOP14920 347 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 ECI1P42126 302 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 GLP1RP43220 463 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 BCAP31P51572 246 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 CR1LQ2VPA4 569 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 Q96MF0 132 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 ALX4Q9H161 411 aaPredicted RBP11.19□□□□□ -0.62
VMP1-217ENST00000593168 ING3Q9NXR8 418 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 OPN4Q9UHM6 478 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 PCDHB10Q9UN67 800 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 FLVCR2Q9UPI3 526 aa11.19□□□□□ -0.62
VMP1-217ENST00000593168 ODAMA1E959 279 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 NPIPB11E5RHQ5 1161 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 LYNX1G3V0Z9 82 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 TMPRSS2O15393 492 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms