RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 GUCA2AQ02747 115 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 SPCS2Q15005 226 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 FAM189A2Q15884 450 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 UTF1Q5T230 341 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 OLFML2AQ68BL7 652 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 HEPN1Q6WQI6 88 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 Q6ZPA2 131 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 Q6ZTK2 550 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 USP43Q70EL4 1123 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 PRIMA1Q86XR5 153 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 OR10R2Q8NGX6 335 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 RAB3CQ96E17 227 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 ZNF48Q96MX3 618 aaPredicted RBP8.11□□□□□ -1.11
TPM4-216ENST00000592822 SLC6A7Q99884 636 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 MS4A7Q9GZW8 240 aaPredicted RBP8.11□□□□□ -1.11
TPM4-216ENST00000592822 DCSTAMPQ9H295 470 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 HEXA-AS1Q9H8Q6 139 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 RHBDL2Q9NX52 303 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 CALYQ9NYX4 217 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 ABRACLQ9P1F3 81 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 AK3Q9UIJ7 227 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 TRAPPC2LQ9UL33 140 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 CEPT1Q9Y6K0 416 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 SESN1Q9Y6P5 492 aa8.11□□□□□ -1.11
TPM4-216ENST00000592822 CUBNO60494 3623 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 METTL21EPA6NDL7 271 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 C12orf77C9JDV5 145 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 NPFFO15130 113 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 NAPSAO96009 420 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 HIST1H1DP16402 221 aaKnown RBP8.1□□□□□ -1.11
TPM4-216ENST00000592822 RCC1P18754 421 aaPredicted RBP8.1□□□□□ -1.11
TPM4-216ENST00000592822 SCGB2A2Q13296 93 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 C5orf24Q7Z6I8 188 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 OR11H6Q8NGC7 330 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 RFESDQ8TAC1 157 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 UBALD1Q8TB05 177 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 RAB2BQ8WUD1 216 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 ARL11Q969Q4 196 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 AJUBAQ96IF1 538 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 KIRREL1Q96J84 757 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 BCL7BQ9BQE9 202 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 HDHD3Q9BSH5 251 aaPredicted RBP8.1□□□□□ -1.11
TPM4-216ENST00000592822 SUCNR1Q9BXA5 334 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 TMEM133Q9H2Q1 129 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 MBNL3Q9NUK0 354 aaKnown RBP8.1□□□□□ -1.11
TPM4-216ENST00000592822 SPATA2Q9UM82 520 aa8.1□□□□□ -1.11
TPM4-216ENST00000592822 A0A087X0M5 115 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 IGHV2-26A0A0B4J1V2 119 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 A0A0U1RQK1 487 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 MDFIC2A0A1B0GVS7 189 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 A0A1B0GX30 115 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 FAM172BPA6NC97 362 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 ODF3BA8MYP8 253 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 H3BMQ9 156 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 MFNGO00587 321 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 ORC5O43913 435 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 GNB3P16520 340 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 NFYBP25208 207 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 CD34P28906 385 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 SAA4P35542 130 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 RORCP51449 518 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 RIPPLY3P57055 190 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 LTC4SQ16873 150 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 DEFB112Q30KQ8 113 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 MIDNQ504T8 468 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 C6orf183Q5T699 404 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 OR52W1Q6IF63 320 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 ZNF880Q6PDB4 577 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 SIGLECL1Q8N7X8 197 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 OR13D1Q8NGV5 346 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 C17orf50Q8WW18 174 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 ISOC1Q96CN7 298 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
TPM4-216ENST00000592822 RBM38Q9H0Z9 239 aaKnown RBP8.09□□□□□ -1.11
TPM4-216ENST00000592822 OCEL1Q9H607 264 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 ZMAT3Q9HA38 289 aaKnown RBP8.09□□□□□ -1.11
TPM4-216ENST00000592822 TAF9BQ9HBM6 251 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 ZNF286AQ9HBT8 521 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPM4-216ENST00000592822 IDI2-AS1Q9NZ38 188 aa8.09□□□□□ -1.11
TPM4-216ENST00000592822 ELF5Q9UKW6 265 aaPredicted RBP8.09□□□□□ -1.11
TPM4-216ENST00000592822 A0A075B6Q4 140 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 TRBV6-6A0A0A6YYG2 114 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 MEIOCA2RUB1 952 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 F2RL2O00254 374 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 SCGNO76038 276 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 IFNA2P01563 188 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 HBZP02008 142 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 ARG1P05089 322 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 ZNF182P17025 639 aaPredicted RBP8.08□□□□□ -1.12
TPM4-216ENST00000592822 LOXL3P58215 753 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 DYNC1I2Q13409 638 aaKnown RBP8.08□□□□□ -1.12
TPM4-216ENST00000592822 HMGN3Q15651 99 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 CDNFQ49AH0 187 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 UBE2NLQ5JXB2 153 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 LDLRAD2Q5SZI1 272 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 ZNF626Q68DY1 528 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 FAM53AQ6NSI3 398 aaPredicted RBP8.08□□□□□ -1.12
TPM4-216ENST00000592822 TRAT1Q6PIZ9 186 aa8.08□□□□□ -1.12
TPM4-216ENST00000592822 ZNF554Q86TJ5 538 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms