RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 RIPK1Q13546 671 aa12.76□□□□□ -0.37
CIRBP-240ENST00000592815 ZNF329Q86UD4 541 aa12.76□□□□□ -0.37
CIRBP-240ENST00000592815 ZFP41Q8N8Y5 198 aa12.76□□□□□ -0.37
CIRBP-240ENST00000592815 ARL11Q969Q4 196 aa12.76□□□□□ -0.37
CIRBP-240ENST00000592815 ZNF184Q99676 751 aaPredicted RBP12.76□□□□□ -0.37
CIRBP-240ENST00000592815 TRBV5-5A0A0J9YX44 114 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 A0A1W2PP11 408 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 PSMB11A5LHX3 300 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 ZNF780AO75290 641 aaPredicted RBP12.75□□□□□ -0.37
CIRBP-240ENST00000592815 IGKV1D-33P01593 117 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 IGKV1-33P01594 117 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 GTF2F2P13984 249 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 IGFBP3P17936 291 aaPredicted RBP12.75□□□□□ -0.37
CIRBP-240ENST00000592815 MED21Q13503 144 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 TTC23Q5W5X9 447 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 DMKNQ6E0U4 476 aaPredicted RBP12.75□□□□□ -0.37
CIRBP-240ENST00000592815 MOB3BQ86TA1 216 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 LINC00596Q86U02 117 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 OR8H3Q8N146 312 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 C5orf56Q8N8D9 126 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 UBALD1Q8TB05 177 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 NEK7Q8TDX7 302 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 CKLFQ9UBR5 152 aa12.75□□□□□ -0.37
CIRBP-240ENST00000592815 TRAV8-7A0A075B6U6 113 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 A0A1W2PPK0 400 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 MAGEA13PA6NCF6 341 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 C15orf65H3BRN8 121 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 CCRL2O00421 344 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 SDCBPO00560 298 aaPredicted RBP12.74□□□□□ -0.37
CIRBP-240ENST00000592815 GPX5O75715 221 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 MT-ND4P03905 459 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 GAPDHP04406 335 aaKnown RBP12.74□□□□□ -0.37
CIRBP-240ENST00000592815 REG1BP48304 166 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 RPS11P62280 158 aaKnown RBP eCLIP12.74□□□□□ -0.37
CIRBP-240ENST00000592815 MPV17LQ2QL34 196 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 Q499Y3 187 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 YIF1BQ5BJH7 314 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 GGHQ92820 318 aa12.74□□□□□ -0.37
CIRBP-240ENST00000592815 NOL4LQ96MY1 436 aaPredicted RBP12.74□□□□□ -0.37
CIRBP-240ENST00000592815 DNAH3Q8TD57 4116 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 SERPINE3A8MV23 424 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 HSD17B6O14756 317 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 FGF16O43320 207 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 SLC35A2P78381 396 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 ST3GAL4Q11206 333 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 GPR176Q14439 515 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 FAM53AQ6NSI3 398 aaPredicted RBP12.73□□□□□ -0.37
CIRBP-240ENST00000592815 ZNF497Q6ZNH5 498 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 STX19Q8N4C7 294 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 DHRSXQ8N5I4 330 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 JAGN1Q8N5M9 183 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 ZNF485Q8NCK3 441 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 SETD9Q8NE22 299 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 OR52M1Q8NGK5 317 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 MUL1Q969V5 352 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
CIRBP-240ENST00000592815 IGHV3-43A0A0B4J1X8 118 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 IGHV3-72A0A0B4J1Y9 119 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 IGHV1-3A0A0C4DH29 117 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 PNMA8CA0A1B0GUJ8 204 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 NCBP2LA6PVI3 153 aaKnown RBP12.72□□□□□ -0.37
CIRBP-240ENST00000592815 MCRIP1C9JLW8 97 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 AIPO00170 330 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 ORC5O43913 435 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 MPIG6BO95866 241 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 IGHV3-43DP0DP04 118 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 ADARB1P78563 741 aaKnown RBP12.72□□□□□ -0.37
CIRBP-240ENST00000592815 ZNF816Q0VGE8 651 aaPredicted RBP12.72□□□□□ -0.37
CIRBP-240ENST00000592815 GLIPR1L1Q6UWM5 242 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 CHPT1Q8WUD6 406 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 RCC1LQ96I51 464 aaKnown RBP12.72□□□□□ -0.37
CIRBP-240ENST00000592815 EAF1Q96JC9 268 aaPredicted RBP12.72□□□□□ -0.37
CIRBP-240ENST00000592815 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 OR14A2Q96R54 314 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 GFOD1Q9NXC2 390 aa12.72□□□□□ -0.37
CIRBP-240ENST00000592815 MRPS28Q9Y2Q9 187 aaKnown RBP12.72□□□□□ -0.37
CIRBP-240ENST00000592815 TRBV5-7A0A0A0MS05 114 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 LINC01548A6NM66 108 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 MAS1P04201 325 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 EBI3Q14213 229 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 SLC35E3Q7Z769 313 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 LINC00311Q8N616 119 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 PACRGLQ8N7B6 248 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 C8orf31Q8N9H6 132 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 SPACA1Q9HBV2 294 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 C8orf4Q9NR00 106 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 TRAPPC2LQ9UL33 140 aa12.71□□□□□ -0.37
CIRBP-240ENST00000592815 EFCAB10A6NFE3 127 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 IGHG2P01859 326 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 FSTP19883 344 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 IL3RAP26951 378 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 RPL23AP62750 156 aaKnown RBP12.7□□□□□ -0.38
CIRBP-240ENST00000592815 SYT6Q5T7P8 510 aaPredicted RBP12.7□□□□□ -0.38
CIRBP-240ENST00000592815 AWAT2Q6E213 333 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 RAB12Q6IQ22 244 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 C18orf65Q6ZTR6 163 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 MRPL41Q8IXM3 137 aaKnown RBP12.7□□□□□ -0.38
CIRBP-240ENST00000592815 LINC00482Q8N8I6 264 aa12.7□□□□□ -0.38
CIRBP-240ENST00000592815 OR51D1Q8NGF3 324 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms