RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SAT2Q96F10 170 aaPredicted RBP13.33□□□□□ -0.28
MBD1-227ENST00000592060 KIRREL1Q96J84 757 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 SMIM3Q9BZL3 60 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 OPN3Q9H1Y3 402 aaPredicted RBP13.33□□□□□ -0.28
MBD1-227ENST00000592060 ZNF71Q9NQZ8 489 aaPredicted RBP13.33□□□□□ -0.28
MBD1-227ENST00000592060 TINAGQ9UJW2 476 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 PROCRQ9UNN8 238 aa13.33□□□□□ -0.28
MBD1-227ENST00000592060 CLEC18AA5D8T8 446 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 ZNF705EA8MWA4 302 aaPredicted RBP13.32□□□□□ -0.28
MBD1-227ENST00000592060 NUDT19A8MXV4 375 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 PGLYRP1O75594 196 aaPredicted RBP13.32□□□□□ -0.28
MBD1-227ENST00000592060 KITLGP21583 273 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 SULT1A2P50226 295 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 NMSQ5H8A3 153 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 EIF5AL1Q6IS14 154 aaKnown RBP13.32□□□□□ -0.28
MBD1-227ENST00000592060 C11orf53Q8IXP5 236 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 UBAC2Q8NBM4 344 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 CLEC18CQ8NCF0 446 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 OR5D13Q8NGL4 314 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 WFDC1Q9HC57 220 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 OBP2BQ9NPH6 170 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 MMP26Q9NRE1 261 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 OR1A1Q9P1Q5 309 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 GLS2Q9UI32 602 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 URB1O60287 2271 aaKnown RBP13.32□□□□□ -0.28
MBD1-227ENST00000592060 IGHV3-64DA0A0J9YX35 117 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 C1QTNF9BB2RNN3 333 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 SIGLEC5O15389 551 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 GRPP07492 148 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 WNT2P09544 360 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 TUBG1P23258 451 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 EIF2S3P41091 472 aaKnown RBP13.32□□□□□ -0.28
MBD1-227ENST00000592060 CMTM1Q8IZ96 169 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 IL22RA2Q969J5 263 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 SPIN2AQ99865 258 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 SPIN2BQ9BPZ2 258 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 TLNRD1Q9H1K6 362 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 TUBG2Q9NRH3 451 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 MBNL3Q9NUK0 354 aaKnown RBP13.32□□□□□ -0.28
MBD1-227ENST00000592060 WIPI2Q9Y4P8 454 aa13.32□□□□□ -0.28
MBD1-227ENST00000592060 INTS1Q8N201 2190 aaKnown RBP13.32□□□□□ -0.28
MBD1-227ENST00000592060 ARID1AO14497 2285 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 TRAV39A0A0B4J263 110 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 IGHV1-18A0A0C4DH31 117 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.31□□□□□ -0.28
MBD1-227ENST00000592060 SH2D1BO14796 132 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 NBL1P41271 181 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 P2RY6Q15077 328 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 HMGN3Q15651 99 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 CLEC9AQ6UXN8 241 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 Q6ZR03 302 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 Q6ZS92 163 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 BHLHA15Q7RTS1 189 aaPredicted RBP13.31□□□□□ -0.28
MBD1-227ENST00000592060 ABHD14BQ96IU4 210 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 IGHV2OR16-5A0A0B4J2B6 119 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.31□□□□□ -0.28
MBD1-227ENST00000592060 ADAM20O43506 726 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 HAND1O96004 215 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 APOC3P02656 99 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 F2RP25116 425 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 LPAR6P43657 344 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 TESK1Q15569 626 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 PXDC1Q5TGL8 231 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 ATRAIDQ6UW56 229 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 IL34Q6ZMJ4 242 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.31□□□□□ -0.28
MBD1-227ENST00000592060 OR10V1Q8NGI7 309 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 C17orf50Q8WW18 174 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 CXXC4Q9H2H0 198 aa13.31□□□□□ -0.28
MBD1-227ENST00000592060 ERRFI1Q9UJM3 462 aaPredicted RBP13.31□□□□□ -0.28
MBD1-227ENST00000592060 SPTBN4Q9H254 2564 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 A0A1B0GWJ7 208 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 OR5H1A6NKK0 313 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 TNFSF12O43508 249 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 IGLV2-14P01704 120 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 VDAC1P21796 283 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 FAM169BQ8N8A8 192 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 BCL2L14Q9BZR8 327 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 SPEF1Q9Y4P9 236 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 SLC25A15Q9Y619 301 aa13.3□□□□□ -0.28
MBD1-227ENST00000592060 TMEM218A2RU14 115 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 TIMM8AO60220 97 aaPredicted RBP13.29□□□□□ -0.28
MBD1-227ENST00000592060 FBXO24O75426 580 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 MED6O75586 246 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 NKX2-1P43699 371 aaPredicted RBP13.29□□□□□ -0.28
MBD1-227ENST00000592060 CEBPDP49716 269 aaPredicted RBP13.29□□□□□ -0.28
MBD1-227ENST00000592060 SRSF3P84103 164 aaKnown RBP13.29□□□□□ -0.28
MBD1-227ENST00000592060 PJVKQ0ZLH3 352 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 BTN1A1Q13410 526 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 MBNL2Q5VZF2 373 aaKnown RBP13.29□□□□□ -0.28
MBD1-227ENST00000592060 ZNF826PQ6ZT77 177 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 IL1F10Q8WWZ1 152 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 GINS3Q9BRX5 216 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 TAAR3PQ9P1P4 343 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 TRAPPC2LQ9UL33 140 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 GTF3C1Q12789 2109 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 ABCD4O14678 606 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 WNT9BO14905 357 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 LMO1P25800 156 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 GNMTQ14749 295 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms