RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 HAGHLQ6PII5 290 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-226ENST00000591534 Q6ZPA2 131 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 MOB3CQ70IA8 216 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 KRT74Q7RTS7 529 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 MKXQ8IYA7 352 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 PRSS35Q8N3Z0 413 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 ZFP41Q8N8Y5 198 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 OR8B12Q8NGG6 310 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 OR6M1Q8NGM8 313 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 HPSE2Q8WWQ2 592 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 AQP3Q92482 292 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 PTX4Q96A99 478 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 R3HDM4Q96D70 268 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 MALSU1Q96EH3 234 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 PLGRKTQ9HBL7 147 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 GPR84Q9NQS5 396 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.64□□□□□ -1.19
BRCA1-226ENST00000591534 V9GYS6 101 aa7.64□□□□□ -1.19
BRCA1-226ENST00000591534 RFPL4AA6NLU0 287 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 RFPL4AL1F8VTS6 287 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 RGS5O15539 181 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 RHBDL1O75783 438 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 NXPH2O95156 264 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 NRASP01111 189 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 RBP4P02753 201 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 COX7A1P24310 79 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 KIR3DL2P43630 455 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 MFGE8Q08431 387 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-226ENST00000591534 CEP78Q5JTW2 689 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 TMEM200BQ69YZ2 307 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 HCP5Q6MZN7 132 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 SFXN4Q6P4A7 337 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 CRIP3Q6Q6R5 217 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 ACP7Q6ZNF0 438 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 TMEM91Q6ZNR0 172 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 POC1AQ8NBT0 407 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 OR51E1Q8TCB6 317 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 C17orf50Q8WW18 174 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 CAPSLQ8WWF8 208 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 AJUBAQ96IF1 538 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 DCUN1D5Q9BTE7 237 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 CHST5Q9GZS9 411 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 C6orf62Q9GZU0 229 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-226ENST00000591534 NXF2Q9GZY0 626 aaKnown RBP7.63□□□□□ -1.19
BRCA1-226ENST00000591534 CST11Q9H112 138 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 ELL3Q9HB65 397 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-226ENST00000591534 C19orf12Q9NSK7 152 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 ZNF222Q9UK12 451 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 TCF19Q9Y242 345 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 PIGLQ9Y2B2 252 aa7.63□□□□□ -1.19
BRCA1-226ENST00000591534 TET2Q6N021 2002 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 IFITM5A6NNB3 132 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 J3QT63 122 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 F2RL2O00254 374 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 NOS1APO75052 506 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 IGLV3-1P01715 115 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 APOA1P02647 267 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 TFF1P04155 84 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 ARG1P05089 322 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 PF4V1P10720 104 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 AZGP1P25311 298 aaKnown RBP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 RPS19P39019 145 aaKnown RBP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 HAAOP46952 286 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 FUT6P51993 359 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 ARHGDIBP52566 201 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 ATP1B3P54709 279 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 RPS11P62280 158 aaKnown RBP eCLIP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 MRPS10P82664 201 aaKnown RBP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 ZNF846Q147U1 533 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 SPCS2Q15005 226 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 RAB11BQ15907 218 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 HACD4Q5VWC8 232 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 HIST2H2BDQ6DRA6 164 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 Q8N2B8 174 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 NDNFQ8TB73 568 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 DEDD2Q8WXF8 326 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 MRPS24Q96EL2 167 aaKnown RBP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 S100A16Q96FQ6 103 aaKnown RBP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 AKR1E2Q96JD6 320 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 GPER1Q99527 375 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 DIABLOQ9NR28 239 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 STEAP1Q9UHE8 339 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 SPATA2Q9UM82 520 aa7.62□□□□□ -1.19
BRCA1-226ENST00000591534 SIRT4Q9Y6E7 314 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-226ENST00000591534 FAM90A8PA6NJQ4 464 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 SLC17A2O00624 439 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 DUS4LO95620 317 aaKnown RBP7.61□□□□□ -1.19
BRCA1-226ENST00000591534 PRB2P02812 416 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-226ENST00000591534 TK1P04183 234 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 HCKP08631 526 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 PGA5P0DJD9 388 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 CD28P10747 220 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 IGFBP3P17936 291 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-226ENST00000591534 HTR2CP28335 458 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 CD40LGP29965 261 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 ZNF93P35789 620 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-226ENST00000591534 VDAC2P45880 294 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-226ENST00000591534 SOX2P48431 317 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 RBP2P50120 134 aa7.61□□□□□ -1.19
BRCA1-226ENST00000591534 DYNLT3P51808 116 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms