RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 MOSP00540 346 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 IL5P05113 134 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 SEC11BP0C7V7 166 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 G0S2P27469 103 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 LPAR6P43657 344 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 ECSCRQ19T08 205 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 IAH1Q2TAA2 248 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-212ENST00000591126 FBXL19-AS1Q494R0 122 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 MIDNQ504T8 468 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 AADACL4Q5VUY2 407 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 HYLS1Q96M11 299 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 ABHD1Q96SE0 405 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 REG4Q9BYZ8 158 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 HSF4Q9ULV5 492 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 SLC45A2Q9UMX9 530 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 KCNK7Q9Y2U2 307 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 NSG2Q9Y328 171 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 OR2W1Q9Y3N9 320 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 H0Y980 276 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PMP2P02689 132 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 CELA3AP09093 270 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 INHBBP09529 407 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 SNRPBP14678 240 aaKnown RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 CEBPGP53567 150 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 RPS27AP62979 156 aaKnown RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 LCN2P80188 198 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM177Q53S58 311 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 OSR1Q8TAX0 266 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 MISP3Q96FF7 219 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 DEPPQ9NTK1 212 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 CEPT1Q9Y6K0 416 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 CEP290O15078 2479 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 TCF20Q9UGU0 1960 aaKnown RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 HMX3A6NHT5 357 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 CHST1O43916 411 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 BCL3P20749 454 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 MST1P26927 711 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PEA15Q15121 130 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 FDX2Q6P4F2 183 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 APOOLQ6UXV4 268 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 ZAR1Q86SH2 424 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PHC2Q8IXK0 858 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PNKDQ8N490 385 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF485Q8NCK3 441 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 R3HDM4Q96D70 268 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 ABHD14BQ96IU4 210 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 ARV1Q9H2C2 271 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 MOB4Q9Y3A3 225 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 NLRC5Q86WI3 1866 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 TRAV6A0A075B6T7 132 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 A0A0B4J293 547 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 HOXB5P09067 269 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 SPP1P10451 314 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 S100A4P26447 101 aaKnown RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PSMB3P49720 205 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 SDSLQ96GA7 329 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 NMES1Q9C002 83 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 WDR61Q9GZS3 305 aaKnown RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 AKIRIN1Q9H9L7 192 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PLXNA3P51805 1871 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 BOLA2-SMG1P6H3BVE0 249 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 HLA-DOBP13765 273 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 S100A1P23297 94 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PHLDA2Q53GA4 152 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 SSX9Q7RTT3 188 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 MSRB3Q8IXL7 192 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PARP16Q8N5Y8 322 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 KIR3DL3Q8N743 410 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 OR14K1Q8NGZ2 314 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 MRPS18AQ9NVS2 196 aaKnown RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 PSENENQ9NZ42 101 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 METTL1Q9UBP6 276 aaKnown RBP5.38□□□□□ -1.55
SMAD4-212ENST00000591126 UNC13CQ8NB66 2214 aa5.38□□□□□ -1.55
SMAD4-212ENST00000591126 IGLV1-36A0A0B4J1U3 117 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 OIP5O43482 229 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 ETV1P50549 477 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 WDFY1Q8IWB7 410 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 OR5AP2Q8NGF4 316 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 OR4D10Q8NGI6 311 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 CHAC2Q8WUX2 184 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 SLC25A46Q96AG3 418 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 MESP1Q9BRJ9 268 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 DUSP21Q9H596 190 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 LYRM2Q9NU23 88 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-212ENST00000591126 IGHV1-18A0A0C4DH31 117 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 MDFIC2A0A1B0GVS7 189 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 OR4C46A6NHA9 309 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 FAM157AC9JC47 383 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 HPXP02790 462 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 MT-ND4P03905 459 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 S100A11P31949 105 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 RAB5CP51148 216 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 ISL1P61371 349 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 S100A12P80511 92 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 HTD2P86397 168 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 HMGN3Q15651 99 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM268Q5VZI3 342 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 IL34Q6ZMJ4 242 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 COLCA1Q6ZS62 124 aa5.37□□□□□ -1.55
SMAD4-212ENST00000591126 NR2C2APQ86WQ0 139 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms