RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 SUCNR1Q9BXA5 334 aa10.56□□□□□ -0.72
DDX39A-213ENST00000590315 MS4A7Q9GZW8 240 aaPredicted RBP10.56□□□□□ -0.72
DDX39A-213ENST00000590315 RBM38Q9H0Z9 239 aaKnown RBP10.56□□□□□ -0.72
DDX39A-213ENST00000590315 C12orf4Q9NQ89 552 aa10.56□□□□□ -0.72
DDX39A-213ENST00000590315 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
DDX39A-213ENST00000590315 TAS2R3Q9NYW6 316 aa10.56□□□□□ -0.72
DDX39A-213ENST00000590315 NDUFA13Q9P0J0 144 aa10.56□□□□□ -0.72
DDX39A-213ENST00000590315 HIVEP2P31629 2446 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 TMEM235A6NFC5 223 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 RAB27BO00194 218 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 EIF4EP06730 217 aaKnown RBP10.55□□□□□ -0.72
DDX39A-213ENST00000590315 IGHV1-8P0DP01 117 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 IGHV4-38-2P0DP08 117 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 MMP9P14780 707 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 MNDAP41218 407 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 DYNC1I2Q13409 638 aaKnown RBP10.55□□□□□ -0.72
DDX39A-213ENST00000590315 ARL6IP1Q15041 203 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 CDNFQ49AH0 187 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 TMEM69Q5SWH9 247 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 TRAT1Q6PIZ9 186 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 BRD3OSQ6XYD6 125 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 C1orf229Q6ZS94 237 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-213ENST00000590315 PNKDQ8N490 385 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 Q8N7P7 452 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 MCFD2Q8NI22 146 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
DDX39A-213ENST00000590315 C22orf15Q8WYQ4 148 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 RAB9BQ9NP90 201 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 ADAM30Q9UKF2 790 aa10.55□□□□□ -0.72
DDX39A-213ENST00000590315 IGHV3-43A0A0B4J1X8 118 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 KBTBD11-OT1A0A1B0GTJ5 212 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 FOXI3A8MTJ6 420 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-213ENST00000590315 C17orf98A8MV24 154 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 SDCBPO00560 298 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-213ENST00000590315 MFNGO00587 321 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 SPINT2O43291 252 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 GSTP1P09211 210 aaKnown RBP10.54□□□□□ -0.72
DDX39A-213ENST00000590315 IGHV3-43DP0DP04 118 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 RCC1P18754 421 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-213ENST00000590315 EPHA1P21709 976 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 PRTN3P24158 256 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 DLX6P56179 175 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 GUCA2AQ02747 115 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 SCGB2A2Q13296 93 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 OR52W1Q6IF63 320 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 MOB1BQ7L9L4 216 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 LURAP1LQ8IV03 231 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 OR13D1Q8NGV5 346 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 NUDCD2Q8WVJ2 157 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 CORO2AQ92828 525 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 RIMS4Q9H426 269 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-213ENST00000590315 HEXA-AS1Q9H8Q6 139 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 IDI2-AS1Q9NZ38 188 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 NUP50Q9UKX7 468 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 MRPS7Q9Y2R9 242 aaKnown RBP10.54□□□□□ -0.72
DDX39A-213ENST00000590315 SESN1Q9Y6P5 492 aa10.54□□□□□ -0.72
DDX39A-213ENST00000590315 A0A0A6YYH2 397 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 IGHV1-69DA0A0B4J2H0 117 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 A6NJ64 397 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 SERPINE3A8MV23 424 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 C12orf77C9JDV5 145 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 ZNF701M0R085 212 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-213ENST00000590315 MMP23AO75900 390 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 IGHV1-69P01742 117 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 IGHV3-7P01780 117 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 APOA1P02647 267 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 RBP4P02753 201 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 ARG1P05089 322 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 ELK1P19419 428 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 GZMHP20718 246 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 GNG10P50151 68 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 LGALS4P56470 323 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 PAX5Q02548 391 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 C17orf58Q2M2W7 97 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 C1orf122Q6ZSJ8 110 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 IL1F10Q8WWZ1 152 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 MAFIPQ8WZ33 124 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 ABCG5Q9H222 651 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 TMEM133Q9H2Q1 129 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 NCOR1P1Q9H4R4 102 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 TAF9BQ9HBM6 251 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 GNG12Q9UBI6 72 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 EXTL2Q9UBQ6 330 aa10.53□□□□□ -0.72
DDX39A-213ENST00000590315 ELF5Q9UKW6 265 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-213ENST00000590315 SONP18583 2426 aaKnown RBP10.53□□□□□ -0.72
DDX39A-213ENST00000590315 CENPVL3A0A0U1RRI6 287 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 MEIOCA2RUB1 952 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 RNASEK-C17orf49H0YIS7 233 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 TOR1AO14656 332 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 XRCC3O43542 346 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 ORC5O43913 435 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 CRLF1O75462 422 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 HBZP02008 142 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 FPR2P25090 351 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 GDNFP39905 211 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 TAS2R20P59543 309 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 HLA-DRB3P79483 266 aa10.52□□□□□ -0.73
DDX39A-213ENST00000590315 RNASE12Q5GAN4 147 aaKnown RBP10.52□□□□□ -0.73
DDX39A-213ENST00000590315 KLF17Q5JT82 389 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms