RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	MPIG6B	O95866	241 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	FAM90A15P	P0C7V4	464 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	FAM90A13P	P0C7W8	464 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	FAM90A14P	P0C7W9	464 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	FAM90A24P	P0C7X0	464 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	PSMA1	P25786	263 aa	Known RBP	13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	DYNLT3	P51808	116 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	PROK1	P58294	105 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	FAM189A2	Q15884	450 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	HLA-DRB5	Q30154	266 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	OLFML2A	Q68BL7	652 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	C5orf24	Q7Z6I8	188 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	ZNF565	Q8N9K5	539 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	UBALD1	Q8TB05	177 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	WFDC12	Q8WWY7	111 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	TCF19	Q9Y242	345 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	LRRC42	Q9Y546	428 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	PEX16	Q9Y5Y5	336 aa		13.93	□□□□□ -0.18
MBD1-221	ENST00000589867	BTBD17	A6NE02	478 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	HAX1	O00165	279 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	SLC17A2	O00624	439 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	IGHV3-7	P01780	117 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	CALR	P27797	417 aa	Known RBP	13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	HTR1D	P28221	377 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	CHAT	P28329	748 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	HTR2C	P28335	458 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	RPS27A	P62979	156 aa	Known RBP	13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.92	□□□□□ -0.18
MBD1-221	ENST00000589867		Q6ZPA2	131 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	CCDC107	Q8WV48	283 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	NICN1	Q9BSH3	213 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	TM2D1	Q9BX74	207 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	SLITRK2	Q9H156	845 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867		Q9H521	79 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	BEX1	Q9HBH7	125 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	DPM3	Q9P2X0	92 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867	PSG11	Q9UQ72	335 aa		13.92	□□□□□ -0.18
MBD1-221	ENST00000589867		A0A1B0GUS0	222 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	TRDV1	A0A1B0GX56	115 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	BUB1B-PAK6	H3BSN5	160 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	PDCD6	O75340	191 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	UBB	P0CG47	229 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	FUT3	P21217	361 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	NFYB	P25208	207 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	LOXL3	P58215	753 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	PLA2G7	Q13093	441 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	P2RY14	Q15391	338 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	LTC4S	Q16873	150 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	OR6M1	Q8NGM8	313 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	NDNF	Q8TB73	568 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	ZNF596	Q8TC21	504 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	SULT4A1	Q9BR01	284 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	SPACA1	Q9HBV2	294 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	ETAA1	Q9NY74	926 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	SIGLEC9	Q9Y336	463 aa		13.91	□□□□□ -0.18
MBD1-221	ENST00000589867	UBE2QL1	A1L167	161 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	C12orf77	C9JDV5	145 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	MCRIP1	C9JLW8	97 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867		J3QR06	171 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	LDLRAD4	O15165	306 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	ARL6IP5	O75915	188 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	BPNT1	O95861	308 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	GLA	P06280	429 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	RCC1	P18754	421 aa	Predicted RBP	13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	GZMH	P20718	246 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	CLDN12	P56749	244 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	OR10A3	P58181	314 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	DIAPH2-AS1	Q14236	149 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	TPTE2P1	Q5T6R2	138 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	ZNF773	Q6PK81	442 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	SHISA2	Q6UWI4	295 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	NR2C2AP	Q86WQ0	139 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	TMEM219	Q86XT9	240 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	SVOP	Q8N4V2	548 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	OR10A7	Q8NGE5	316 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	OR4K15	Q8NH41	348 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	OR9G1	Q8NH87	305 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	CST11	Q9H112	138 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	LPAR5	Q9H1C0	372 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	RNF114	Q9Y508	228 aa		13.9	□□□□□ -0.18
MBD1-221	ENST00000589867	AIP	O00170	330 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	F2RL2	O00254	374 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	ORC5	O43913	435 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	CD24	P25063	80 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	SYT6	Q5T7P8	510 aa	Predicted RBP	13.89	□□□□□ -0.19
MBD1-221	ENST00000589867		Q6ZS46	218 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	FAM89B	Q8N5H3	189 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	KCNG3	Q8TAE7	436 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	MRPL30	Q8TCC3	161 aa	Known RBP	13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	NEK7	Q8TDX7	302 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	ARL11	Q969Q4	196 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	CITED1	Q99966	193 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	TMEM59	Q9BXS4	323 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	MMP28	Q9H239	520 aa		13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	MBNL3	Q9NUK0	354 aa	Known RBP	13.89	□□□□□ -0.19
MBD1-221	ENST00000589867	TRAV1-2	A0A0B4J238	106 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867		A0A1W2PPE3	182 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	LEUTX	A8MZ59	168 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	CCRL2	O00421	344 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms