RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 OVCH2Q7RTZ1 564 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 C10orf35Q96D05 121 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 ABHD14BQ96IU4 210 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 LRRC30A6NM36 301 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 CYC1P08574 325 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 HNF1AP20823 631 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 TAGLN2P37802 199 aaKnown RBP12.54□□□□□ -0.4
RETREG3-208ENST00000589797 FGF8P55075 233 aaPredicted RBP12.54□□□□□ -0.4
RETREG3-208ENST00000589797 KLF3P57682 345 aaPredicted RBP12.54□□□□□ -0.4
RETREG3-208ENST00000589797 RAB4BP61018 213 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 VAX1Q5SQQ9 334 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 LHX4Q969G2 390 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 RPUSD4Q96CM3 377 aaKnown RBP12.54□□□□□ -0.4
RETREG3-208ENST00000589797 LIN7CQ9NUP9 197 aaKnown RBP12.54□□□□□ -0.4
RETREG3-208ENST00000589797 RPH3ALQ9UNE2 315 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 NUP210Q8TEM1 1887 aaPredicted RBP12.54□□□□□ -0.4
RETREG3-208ENST00000589797 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 CST4P01036 141 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 RUNX1Q01196 453 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 RAB31Q13636 194 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
RETREG3-208ENST00000589797 FN3KRPQ9HA64 309 aa12.54□□□□□ -0.4
RETREG3-208ENST00000589797 RNASEK-C17orf49H0YIS7 233 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 CDX4O14627 284 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-208ENST00000589797 LHX2P50458 406 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 FAM201AQ5SY85 155 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 FAHD2BQ6P2I3 314 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-208ENST00000589797 FAHD2AQ96GK7 314 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 COL4A4P53420 1690 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-208ENST00000589797 ST8SIA5O15466 376 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 TNFAIP6P98066 277 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-208ENST00000589797 ADIRFQ15847 76 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 ZNF528Q3MIS6 628 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 C1QTNF12Q5T7M4 302 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 GGNQ86UU5 652 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 CYYR1Q96J86 154 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 OR5B12Q96R08 314 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 EGLN1Q9GZT9 426 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 HIPK2Q9H2X6 1198 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 ANKHD1Q8IWZ3 2542 aaKnown RBP12.53□□□□□ -0.4
RETREG3-208ENST00000589797 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 UBE2G2P60604 165 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 SSTP61278 116 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 OR52L2PQ8NGH6 319 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 LEAP2Q969E1 77 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 S1PR3Q99500 378 aa12.53□□□□□ -0.4
RETREG3-208ENST00000589797 PTPN13Q12923 2485 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 TNFSF10P50591 281 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 TMEM211Q6ICI0 200 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 NECAP1Q8NC96 275 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 OR52M1Q8NGK5 317 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 DFFBO76075 338 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.4
RETREG3-208ENST00000589797 CLDN18P56856 261 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 HES1Q14469 280 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 KLF14Q8TD94 323 aaPredicted RBP12.52□□□□□ -0.4
RETREG3-208ENST00000589797 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.4
RETREG3-208ENST00000589797 CFAP54Q96N23 3096 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 hCG_38984A0A1B0GV85 526 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 OR2A4O95047 310 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 OR2H2O95918 312 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 FGF12P61328 243 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 FAM122CQ6P4D5 195 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 OR10X1Q8NGY0 326 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 OR2A7Q96R45 310 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 SERTAD4Q9NUC0 356 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 G6PCP35575 357 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 H3F3AP84243 136 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 PDZD11Q5EBL8 140 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 CBLN2Q8IUK8 224 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 NIPSNAP3BQ9BS92 247 aa12.52□□□□□ -0.41
RETREG3-208ENST00000589797 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 CD74P04233 296 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 KITLGP21583 273 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 DTYMKP23919 212 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 FHITP49789 147 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 DYNLT3P51808 116 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 NMES1Q9C002 83 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 DLL3Q9NYJ7 618 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 MTCH1Q9NZJ7 389 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 RCC2Q9P258 522 aaKnown RBP12.51□□□□□ -0.41
RETREG3-208ENST00000589797 IGLV3-32A0A0A0MS00 114 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 SHOXO15266 292 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 GNB1P62873 340 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 GUK1Q16774 197 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 HIST2H3PS2Q5TEC6 136 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 Q8IYB0 196 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 ISOC2Q96AB3 205 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 ARV1Q9H2C2 271 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 F8VVB4 439 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 F8VWA3 439 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 APELAP0DMC3 54 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 ZNF708P17019 499 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 VDAC1P21796 283 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms