RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 C6orf201Q7Z4U5 140 aa16.41■□□□□ 0.22
DDX39A-207ENST00000588542 CCDC107Q8WV48 283 aa16.41■□□□□ 0.22
DDX39A-207ENST00000588542 KIRREL1Q96J84 757 aa16.41■□□□□ 0.22
DDX39A-207ENST00000588542 NEDD4LQ96PU5 975 aa16.41■□□□□ 0.22
DDX39A-207ENST00000588542 URM1Q9BTM9 101 aaKnown RBP16.41■□□□□ 0.22
DDX39A-207ENST00000588542 LIN7BQ9HAP6 207 aa16.41■□□□□ 0.22
DDX39A-207ENST00000588542 ZNRD1Q9P1U0 126 aa16.41■□□□□ 0.22
DDX39A-207ENST00000588542 C15orf65H3BRN8 121 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 TRIM77I1YAP6 450 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 CA11O75493 328 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 ARG1P05089 322 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 PAX6P26367 422 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 CD34P28906 385 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 BLVRBP30043 206 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-207ENST00000588542 TGFBR1P36897 503 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 EFNB2P52799 333 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 TMEM50BP56557 158 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 TIMM50Q3ZCQ8 353 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 OR52W1Q6IF63 320 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 LHFPL4Q7Z7J7 247 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-207ENST00000588542 OR13F1Q8NGS4 319 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 OR4K15Q8NH41 348 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 RFESDQ8TAC1 157 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 FAAP24Q9BTP7 215 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 C19orf24Q9BVV8 132 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 CLEC7AQ9BXN2 247 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 ZNF286AQ9HBT8 521 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 IDI2-AS1Q9NZ38 188 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 RAB22AQ9UL26 194 aa16.4■□□□□ 0.22
DDX39A-207ENST00000588542 A0A087X0M5 115 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 A0A1B0GX30 115 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 FAM172BPA6NC97 362 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 AIREO43918 545 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 RNASE1P07998 156 aaKnown RBP16.39■□□□□ 0.21
DDX39A-207ENST00000588542 GZMHP20718 246 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 IER3P46695 156 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 VEGFCP49767 419 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 MXD1Q05195 221 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 ABHD12Q8N2K0 398 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 BEND2Q8NDZ0 799 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 MRPL30Q8TCC3 161 aaKnown RBP16.39■□□□□ 0.21
DDX39A-207ENST00000588542 FAM216AQ8WUB2 273 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 MEGF9Q9H1U4 602 aa16.39■□□□□ 0.21
DDX39A-207ENST00000588542 ZMAT3Q9HA38 289 aaKnown RBP16.39■□□□□ 0.21
DDX39A-207ENST00000588542 TBL2Q9Y4P3 447 aaKnown RBP16.39■□□□□ 0.21
DDX39A-207ENST00000588542 IGHV4-59P01825 116 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 RCC1P18754 421 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-207ENST00000588542 LGALS4P56470 323 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 DYNC1I2Q13409 638 aaKnown RBP16.38■□□□□ 0.21
DDX39A-207ENST00000588542 SFXN4Q6P4A7 337 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 DYNAPQ8N1N2 210 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 TMEM86BQ8N661 226 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 SSMEM1Q8WWF3 244 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 FUNDC2Q9BWH2 189 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 MRPS26Q9BYN8 205 aaKnown RBP16.38■□□□□ 0.21
DDX39A-207ENST00000588542 MBNL3Q9NUK0 354 aaKnown RBP16.38■□□□□ 0.21
DDX39A-207ENST00000588542 DAPK2Q9UIK4 370 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 TRAPPC2LQ9UL33 140 aa16.38■□□□□ 0.21
DDX39A-207ENST00000588542 ORC5O43913 435 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 PAHP00439 452 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 IGLV1-47P01700 117 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 RAB6AP20340 208 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 NFYBP25208 207 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 LSM3P62310 102 aaKnown RBP16.37■□□□□ 0.21
DDX39A-207ENST00000588542 OR10A7Q8NGE5 316 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 OR56B1Q8NGI3 324 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 OR4P4Q8NGL7 312 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 UBALD1Q8TB05 177 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 ARL11Q969Q4 196 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 TNFRSF19Q9NS68 423 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 PLEKHJ1Q9NW61 149 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 HSF4Q9ULV5 492 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 POMT1Q9Y6A1 747 aa16.37■□□□□ 0.21
DDX39A-207ENST00000588542 C12orf77C9JDV5 145 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 LTC4SQ16873 150 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 MOGAT2Q3SYC2 334 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 PLAC9Q5JTB6 97 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 Q6ZPA2 131 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 LEAP2Q969E1 77 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 PTX4Q96A99 478 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 ARHGAP5-AS1Q96IT6 56 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 PECRQ9BY49 303 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 CHIAQ9BZP6 476 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 TENM1Q9UKZ4 2725 aa16.36■□□□□ 0.21
DDX39A-207ENST00000588542 DNHD1Q96M86 4753 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 F2RL2O00254 374 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 NAPSAO96009 420 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 TFAP2AP05549 437 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 SNRPBP14678 240 aaKnown RBP16.35■□□□□ 0.21
DDX39A-207ENST00000588542 ALDH3B2P48448 385 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 C6orf183Q5T699 404 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 MINOS1Q5TGZ0 78 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 FAM53AQ6NSI3 398 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-207ENST00000588542 C16orf87Q6PH81 154 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 Q6ZTK2 550 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 C5orf24Q7Z6I8 188 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 MALSU1Q96EH3 234 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 AK3Q9UIJ7 227 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 MINOS1-NBL1R4GNA1 71 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms