RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
ERCC1-205ENST00000587888 ATAD3CQ5T2N8 411 aa11.13□□□□□ -0.63
ERCC1-205ENST00000587888 OR2T10Q8NGZ9 312 aa11.13□□□□□ -0.63
ERCC1-205ENST00000587888 RBMXL1Q96E39 390 aaKnown RBP11.13□□□□□ -0.63
ERCC1-205ENST00000587888 METTL9Q9H1A3 318 aa11.13□□□□□ -0.63
ERCC1-205ENST00000587888 DNAH3Q8TD57 4116 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 IGHV3-43A0A0B4J1X8 118 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 H0YHG0 523 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 AP4M1O00189 453 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 MPZL2O60487 215 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 CSTBP04080 98 aaKnown RBP11.12□□□□□ -0.63
ERCC1-205ENST00000587888 IGHV3-43DP0DP04 118 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 GABRB1P18505 474 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 LUMP51884 338 aaPredicted RBP11.12□□□□□ -0.63
ERCC1-205ENST00000587888 MRPL28Q13084 256 aaKnown RBP11.12□□□□□ -0.63
ERCC1-205ENST00000587888 GPR50Q13585 617 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 ZNF529Q6P280 563 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 ASCL4Q6XD76 172 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 TGIF2LXQ8IUE1 241 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 CBR4Q8N4T8 237 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 Q8N9W7 124 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 Q8NFD4 153 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 OR52I1Q8NGK6 324 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 OR52N1Q8NH53 320 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 RGP1Q92546 391 aaPredicted RBP11.12□□□□□ -0.63
ERCC1-205ENST00000587888 Q96MT0 163 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 PRR25Q96S07 402 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 S100A13Q99584 98 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 RASL11BQ9BPW5 248 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 JAM3Q9BX67 310 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 ABCG5Q9H222 651 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 LIN7CQ9NUP9 197 aaKnown RBP11.12□□□□□ -0.63
ERCC1-205ENST00000587888 COL7A1Q02388 2944 aa11.12□□□□□ -0.63
ERCC1-205ENST00000587888 TMEM30CPA0ZSE6 113 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 ZNF736B4DX44 427 aaPredicted RBP11.11□□□□□ -0.63
ERCC1-205ENST00000587888 GEMIN2O14893 280 aaKnown RBP11.11□□□□□ -0.63
ERCC1-205ENST00000587888 RAMP3O60896 148 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 SERPINA2P20848 420 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 ECI1P42126 302 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 GP2P55259 537 aaKnown RBP11.11□□□□□ -0.63
ERCC1-205ENST00000587888 RBM11P57052 281 aaKnown RBP11.11□□□□□ -0.63
ERCC1-205ENST00000587888 PAX5Q02548 391 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 RAB40BQ12829 278 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 CXorf66Q5JRM2 361 aaPredicted RBP11.11□□□□□ -0.63
ERCC1-205ENST00000587888 Q8N6K4 173 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 OR5M8Q8NGP6 311 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 OR8U1Q8NH10 309 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 RHOXF1Q8NHV9 184 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 GPR148Q8TDV2 347 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 NEK7Q8TDX7 302 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 RTN4IP1Q8WWV3 396 aaPredicted RBP11.11□□□□□ -0.63
ERCC1-205ENST00000587888 ORAI1Q96D31 301 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 GON7Q9BXV9 100 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 PLSCR3Q9NRY6 295 aa11.11□□□□□ -0.63
ERCC1-205ENST00000587888 C15orf65H3BRN8 121 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 MOSP00540 346 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 CD2P06729 351 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 NHLRC4P0CG21 123 aaPredicted RBP11.1□□□□□ -0.63
ERCC1-205ENST00000587888 IL3RAP26951 378 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 CD1BP29016 333 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 ZNF93P35789 620 aaPredicted RBP11.1□□□□□ -0.63
ERCC1-205ENST00000587888 CDX1P47902 265 aaPredicted RBP11.1□□□□□ -0.63
ERCC1-205ENST00000587888 KIR2DS1Q14954 304 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 KLHL22Q53GT1 634 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 DDI2Q5TDH0 399 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 IZUMO1Q8IYV9 350 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 LINC00311Q8N616 119 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 TMEM106AQ96A25 262 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 S1PR3Q99500 378 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 ASCL2Q99929 193 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 IFT22Q9H7X7 185 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 TMEM138Q9NPI0 162 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 RPL36Q9Y3U8 105 aaKnown RBP11.1□□□□□ -0.63
ERCC1-205ENST00000587888 U3KQK5 164 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
ERCC1-205ENST00000587888 H3BNX3 289 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 AIPO00170 330 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 SLC31A2O15432 143 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 ORC5O43913 435 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 MT-ND4P03905 459 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 LIMS3P0CW19 117 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 LIMS4P0CW20 117 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 F2RL1P55085 397 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 PPP3R1P63098 170 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 FOXE3Q13461 319 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 SLC22A6Q4U2R8 563 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 C9orf66Q5T8R8 295 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 XAF1Q6GPH4 301 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 OR52M1Q8NGK5 317 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 ST6GALNAC6Q969X2 333 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 HSPB9Q9BQS6 159 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 GFOD1Q9NXC2 390 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 FAM53CQ9NYF3 392 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 IL36GQ9NZH8 169 aa11.09□□□□□ -0.63
ERCC1-205ENST00000587888 LSM4Q9Y4Z0 139 aaKnown RBP11.09□□□□□ -0.63
ERCC1-205ENST00000587888 A0A1W2PP11 408 aa11.08□□□□□ -0.64
ERCC1-205ENST00000587888 SEC14L6B5MCN3 397 aa11.08□□□□□ -0.64
ERCC1-205ENST00000587888 DYNC1I1O14576 645 aa11.08□□□□□ -0.64
ERCC1-205ENST00000587888 RRP9O43818 475 aaKnown RBP11.08□□□□□ -0.64
ERCC1-205ENST00000587888 ELANEP08246 267 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms