RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 A0A087X0M5 115 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 A0A1B0GX30 115 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 HSPB6O14558 160 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 DEGS1O15121 323 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 CYB5AP00167 134 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 CELP19835 753 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 PRKACBP22694 351 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 PSMA1P25786 263 aaKnown RBP9.17□□□□□ -0.94
LIG3-207ENST00000586119 PTGFRP43088 359 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 MAP2K4P45985 399 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 PRRX1P54821 245 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 TRAM1Q15629 374 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 XAF1Q6GPH4 301 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 LHFPL2Q6ZUX7 228 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 UTS2BQ765I0 119 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 TSPAN14Q8NG11 270 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 OR4D6Q8NGJ1 314 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 OR13A1Q8NGR1 328 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 OR13C9Q8NGT0 318 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 RFESDQ8TAC1 157 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 PP6455Q8WZ26 134 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 GHSRQ92847 366 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 PGLYRP3Q96LB9 341 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 P2RX4Q99571 388 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 MGLLQ99685 303 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 ZNF581Q9P0T4 197 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 MOB4Q9Y3A3 225 aa9.17□□□□□ -0.94
LIG3-207ENST00000586119 SIRT4Q9Y6E7 314 aaPredicted RBP9.17□□□□□ -0.94
LIG3-207ENST00000586119 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 TRIM64CA6NLI5 447 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 ZNF729A6NN14 1252 aaPredicted RBP9.16□□□□□ -0.94
LIG3-207ENST00000586119 J3QR06 171 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 CD2P06729 351 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 FAM106CPP0CH98 169 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 HSMCR30P0CW71 290 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 CPEP16870 476 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 ZNF20P17024 532 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 CEACAM3P40198 252 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 MNDAP41218 407 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 GNG10P50151 68 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 THNSL2Q86YJ6 484 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 C5orf56Q8N8D9 126 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 KLHL30-AS1Q8NEE0 82 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 OR13C3Q8NGS6 347 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 OR9G1Q8NH87 305 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 TOMM40LQ969M1 308 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 RPEQ96AT9 228 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 RAX2Q96IS3 184 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 ASCL2Q99929 193 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 PDCD1LG2Q9BQ51 273 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 NEK6Q9HC98 313 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 KIF25Q9UIL4 384 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 DHDHQ9UQ10 334 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 PSG11Q9UQ72 335 aa9.16□□□□□ -0.94
LIG3-207ENST00000586119 IGHV3-72A0A0B4J1Y9 119 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 TRAV24A0A0B4J272 114 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 TRBV5-5A0A0J9YX44 114 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 KBTBD11-OT1A0A1B0GTJ5 212 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 FUOMA2VDF0 154 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 MAGEA13PA6NCF6 341 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 SERPINE3A8MV23 424 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 NUDT19A8MXV4 375 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 TMEM225BP0DP42 221 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 TMEM11P17152 192 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 MAPK3P27361 379 aaPredicted RBP9.15□□□□□ -0.94
LIG3-207ENST00000586119 CALRP27797 417 aaKnown RBP9.15□□□□□ -0.94
LIG3-207ENST00000586119 MYCNOSP40205 109 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 GLP1RP43220 463 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 RAB25P57735 213 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 ZP1P60852 638 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 HES1Q14469 280 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 DEFB136Q30KP8 78 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 Q499Y3 187 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 NKAPLQ5M9Q1 402 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 SYT6Q5T7P8 510 aaPredicted RBP9.15□□□□□ -0.94
LIG3-207ENST00000586119 SERPINA12Q8IW75 414 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 PARP16Q8N5Y8 322 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 ZFP41Q8N8Y5 198 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 PLPPR1Q8TBJ4 325 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 TSEN15Q8WW01 171 aaKnown RBP9.15□□□□□ -0.94
LIG3-207ENST00000586119 PHYHIPQ92561 330 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 SPSB1Q96BD6 273 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 PRR25Q96S07 402 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 CALYQ9NYX4 217 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 IDI2-AS1Q9NZ38 188 aa9.15□□□□□ -0.94
LIG3-207ENST00000586119 MEIKINA0A087WXM9 373 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 M0QZK8 103 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 IGKV1D-33P01593 117 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 IGKV1-33P01594 117 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 RPLP1P05386 114 aaKnown RBP9.14□□□□□ -0.95
LIG3-207ENST00000586119 CSN2P05814 226 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 OCM2P0CE71 109 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 GALP22466 123 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 REG1BP48304 166 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 LUMP51884 338 aaPredicted RBP9.14□□□□□ -0.95
LIG3-207ENST00000586119 ARHGDIBP52566 201 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 RPS11P62280 158 aaKnown RBP eCLIP9.14□□□□□ -0.95
LIG3-207ENST00000586119 DGCR2P98153 550 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 DOC2BQ14184 412 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 CCDC144NLQ6NUI1 221 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms