RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ANKRD55Q3KP44 614 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 FBXL19-AS1Q494R0 122 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 NCMAPQ5T1S8 102 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 GAPTQ8N292 157 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 ASCC1Q8N9N2 400 aaKnown RBP12.3□□□□□ -0.44
MKS1-211ENST00000581761 CCDC71LQ8N9Z2 235 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 LRRC46Q96FV0 321 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 CABLES2Q9BTV7 478 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 RSRP1Q9BUV0 290 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 ESRP2Q9H6T0 727 aaKnown RBP12.3□□□□□ -0.44
MKS1-211ENST00000581761 NAA60Q9H7X0 242 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 PRR13Q9NZ81 148 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 DNAJB11Q9UBS4 358 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 ZDHHC8Q9ULC8 765 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 WIPI2Q9Y4P8 454 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 CADP27708 2225 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 ITPR2Q14571 2701 aa12.3□□□□□ -0.44
MKS1-211ENST00000581761 IGKV1-6A0A0C4DH72 117 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 C5orf51A6NDU8 294 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 DBX1A6NMT0 343 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 IFNL4K9M1U5 179 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 PSPNO60542 156 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 SERPINF1P36955 418 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 CFHR2P36980 270 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 GATA4P43694 442 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 OR3A1P47881 315 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 KCNJ3P48549 501 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 SORDQ00796 357 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 SNTB1Q13884 538 aaKnown RBP12.29□□□□□ -0.44
MKS1-211ENST00000581761 CDSNQ15517 529 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 PHLDA2Q53GA4 152 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 GSG1LQ6UXU4 331 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 FAM90A1Q86YD7 464 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 ZNF565Q8N9K5 539 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 LINC01560Q8TB33 94 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 PLPPR2Q96GM1 343 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 COMMD9Q9P000 198 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 IL19Q9UHD0 177 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 METRNQ9UJH8 293 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
MKS1-211ENST00000581761 DIDO1Q9BTC0 2240 aaKnown RBP12.29□□□□□ -0.44
MKS1-211ENST00000581761 NOTCH2Q04721 2471 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 IGHV3OR15-7A0A075B7D8 119 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 FXYD6-FXYD2A0A087WZ82 144 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 C13orf42A0A1B0GVH6 325 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 RGS13O14921 159 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 TSC22D2O75157 780 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 TUSC2O75896 110 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 CD8AP01732 235 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 CD3EP07766 207 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 PRDX2P32119 198 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 CD80P33681 288 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 HMGN3Q15651 99 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 LGALSLQ3ZCW2 172 aaPredicted RBP12.28□□□□□ -0.44
MKS1-211ENST00000581761 SLC35E4Q6ICL7 350 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 GCSAMQ8N6F7 178 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 OR11L1Q8NGX0 322 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 LILRB4Q8NHJ6 448 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 SECTM1Q8WVN6 248 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 ITLN2Q8WWU7 325 aaPredicted RBP12.28□□□□□ -0.44
MKS1-211ENST00000581761 SEC22AQ96IW7 307 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 KIRREL1Q96J84 757 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 DIRC2Q96SL1 478 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 GON7Q9BXV9 100 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 SLC5A7Q9GZV3 580 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 RAB18Q9NP72 206 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 KCNIP1Q9NZI2 227 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 RNF7Q9UBF6 113 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
MKS1-211ENST00000581761 LRBAP50851 2863 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 TRAV14DV4A0A0A6YYC5 116 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 SHISA9B4DS77 424 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.27□□□□□ -0.45
MKS1-211ENST00000581761 CLDN1O95832 211 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 PSG2P11465 335 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 GABRA2P47869 451 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 H1FOOQ8IZA3 346 aaPredicted RBP12.27□□□□□ -0.45
MKS1-211ENST00000581761 CD177Q8N6Q3 437 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 OR10J5Q8NHC4 309 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
MKS1-211ENST00000581761 ERGIC1Q969X5 290 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 METTL8Q9H825 291 aaKnown RBP12.27□□□□□ -0.45
MKS1-211ENST00000581761 KCNJ16Q9NPI9 418 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 SLC2A9Q9NRM0 540 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.45
MKS1-211ENST00000581761 KIF25Q9UIL4 384 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 KCNIP3Q9Y2W7 256 aa12.27□□□□□ -0.45
MKS1-211ENST00000581761 PCNX1Q96RV3 2341 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 IGKV1D-13A0A0B4J2D9 117 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 HMSDA8MTL9 139 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 NPIPB11E5RHQ5 1161 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 E7EQL1 145 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 L7N2F9 121 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 GPR31O00270 319 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 ADAP1O75689 374 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 SNAPC5O75971 98 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 LHBP01229 141 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 HOXB5P09067 269 aa12.26□□□□□ -0.45
MKS1-211ENST00000581761 IGKV1-13P0DP09 117 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms