RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TMEM82A0PJX8 343 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 NKX6-3A6NJ46 265 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 CEACAM18A8MTB9 384 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 BOLA2-SMG1P6H3BVE0 249 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 SNAPC5O75971 98 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 OR7C1O76099 320 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 ZNF205O95201 554 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 IGHV2-5P01817 119 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 ANXA3P12429 323 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 CHATP28329 748 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 TMEM50BP56557 158 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 GRK1Q15835 563 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 TAF9Q16594 264 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 SCGB2B2Q4G0G5 96 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 PLAC9Q5JTB6 97 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 FAM201AQ5SY85 155 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 GLDNQ6ZMI3 551 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 TCTE3Q8IZS6 198 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 DRAXINQ8NBI3 349 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 DEFB108BQ8NET1 73 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 BEST4Q8NFU0 473 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 OR8B3Q8NGG8 313 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 ASB13Q8WXK3 278 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 SLAMF9Q96A28 289 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 NEIL1Q96FI4 390 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 OR8B2Q96RD0 313 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 TMEM246Q9BRR3 403 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 DNTTIP1Q9H147 329 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 PATZ1Q9HBE1 687 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 ZNF286AQ9HBT8 521 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 C12orf4Q9NQ89 552 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 KCNK7Q9Y2U2 307 aa11.24□□□□□ -0.61
CSNK1D-220ENST00000581737 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 A0A0A6YYJ9 748 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 A8MV72 311 aaPredicted RBP11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 MCRIP1C9JLW8 97 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 WNT9BO14905 357 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 WIPF1O43516 503 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 SSX5O60225 188 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 HRH1P35367 487 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 SNU13P55769 128 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 GMFBP60983 142 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 UBE2MP61081 183 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 LMO4P61968 165 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 CDK10Q15131 360 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 SURF2Q15527 256 aaPredicted RBP11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 ESCO2Q56NI9 601 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 ATAD3CQ5T2N8 411 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 STUMQ69YW2 141 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 FAHD2BQ6P2I3 314 aaPredicted RBP11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 SLC36A1Q7Z2H8 476 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 RNF144BQ7Z419 303 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 OR6F1Q8NGZ6 308 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 NEK7Q8TDX7 302 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 FAHD2AQ96GK7 314 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 TINAGL1Q9GZM7 467 aaPredicted RBP11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 WDR13Q9H1Z4 485 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 PPA2Q9H2U2 334 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 GHITMQ9H3K2 345 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 HES4Q9HCC6 221 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 CHMP1AQ9HD42 196 aaPredicted RBP11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 MGAT4AQ9UM21 535 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 DOCK11Q5JSL3 2073 aa11.23□□□□□ -0.61
CSNK1D-220ENST00000581737 IGHV3OR15-7A0A075B7D8 119 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 A0A0B4J293 547 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 OR2AT4A6NND4 320 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 B4DSR2 109 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 M0QYG6 137 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 GEMIN2O14893 280 aaKnown RBP11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 ADAM20O43506 726 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 KNG1P01042 644 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 GYPAP02724 150 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 FAM157CP0CG43 387 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 PRKACAP17612 351 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 BCL3P20749 454 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 GLP1RP43220 463 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 NPY4RP50391 375 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 ERVK11-1P61568 191 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 IKZF1Q13422 519 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 SRSF7Q16629 238 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 SPIN3Q5JUX0 258 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 CYB5R2Q6BCY4 276 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 FAAP20Q6NZ36 180 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 ACP7Q6ZNF0 438 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 C6orf201Q7Z4U5 140 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 FAM58AQ8N1B3 248 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 LINC01356Q8N9X3 169 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 OR5AP2Q8NGF4 316 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 C1orf159Q96HA4 380 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 ZNF488Q96MN9 340 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 ST6GALNAC5Q9BVH7 336 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 NECAP2Q9NVZ3 263 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 MTCH1Q9NZJ7 389 aa11.22□□□□□ -0.61
CSNK1D-220ENST00000581737 KAAG1Q9UBP8 84 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms