RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 RBMXL1Q96E39 390 aaKnown RBP7.78□□□□□ -1.16
TOP3A-211ENST00000581536 KIRREL1Q96J84 757 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 S100A13Q99584 98 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 TMED9Q9BVK6 235 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 VCXQ9H320 206 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 ZNF702PQ9H963 129 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 CALYQ9NYX4 217 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 IDI2-AS1Q9NZ38 188 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 IL36GQ9NZH8 169 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 OR6C3Q9NZP0 311 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 DPM3Q9P2X0 92 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 MRPS28Q9Y2Q9 187 aaKnown RBP7.78□□□□□ -1.16
TOP3A-211ENST00000581536 MINOS1-NBL1R4GNA1 71 aa7.78□□□□□ -1.16
TOP3A-211ENST00000581536 SH2D7A6NKC9 451 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-211ENST00000581536 NPIPB11E5RHQ5 1161 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 PLXNB1O43157 2135 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 KCNAB3O43448 404 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 TSPAN15O95858 294 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 MT-ND4P03905 459 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 VSIG10L2P0DP72 767 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 MYF6P23409 242 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 CD34P28906 385 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 SSTR5P35346 364 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 MAP2K4P45985 399 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 PRRX1P54821 245 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 TAS2R43P59537 309 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 SLC35A2P78381 396 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 GABPB1Q06547 395 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-211ENST00000581536 SPHARQ15513 63 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 MED22Q15528 200 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 HLA-DRB5Q30154 266 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 NHLRC3Q5JS37 347 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 OR10K2Q6IF99 312 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 LRRTM1Q86UE6 522 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 RTN4RL2Q86UN3 420 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 FAM110DQ8TAY7 271 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-211ENST00000581536 MYDGFQ969H8 173 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 TMEM203Q969S6 136 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 CPNE2Q96FN4 548 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-211ENST00000581536 DUSP21Q9H596 190 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 SERTAD4Q9NUC0 356 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 SCN3BQ9NY72 215 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 CKLFQ9UBR5 152 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 PSG11Q9UQ72 335 aa7.77□□□□□ -1.17
TOP3A-211ENST00000581536 DNAH3Q8TD57 4116 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 A0A087X0M5 115 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 IGHV3-43A0A0B4J1X8 118 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 A0A1B0GX30 115 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 LEUTXA8MZ59 168 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 H0YHG0 523 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 H3BS24 57 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 J3QR06 171 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 F2RL2O00254 374 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 IGHV3-43DP0DP04 118 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 GTF2F2P13984 249 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 GNG10P50151 68 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 DYNLT3P51808 116 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 TMEM95Q3KNT9 176 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 TPTE2P1Q5T6R2 138 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 LIPKQ5VXJ0 399 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 AWAT2Q6E213 333 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 SIGIRRQ6IA17 410 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 TMEM91Q6ZNR0 172 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 CEACAM19Q7Z692 300 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 KLHDC1Q8N7A1 406 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 OR4C13Q8NGP0 309 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 ZNF596Q8TC21 504 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 FAM46BQ96A09 425 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 MND1Q9BWT6 205 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 SELENOIQ9C0D9 397 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 NPFFR1Q9GZQ6 430 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 CCDC90BQ9GZT6 254 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 KCNK15Q9H427 330 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 NCOR1P1Q9H4R4 102 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 IFT22Q9H7X7 185 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 LINC00574Q9H8X3 128 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 RAB18Q9NP72 206 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 PEX16Q9Y5Y5 336 aa7.76□□□□□ -1.17
TOP3A-211ENST00000581536 UBE2QL1A1L167 161 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 C15orf65H3BRN8 121 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 TIMM23O14925 209 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 ZNF780AO75290 641 aaPredicted RBP7.75□□□□□ -1.17
TOP3A-211ENST00000581536 CRTAPO75718 401 aaPredicted RBP7.75□□□□□ -1.17
TOP3A-211ENST00000581536 IL1AP01583 271 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 AMY1AP04745 511 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 AMY2AP04746 511 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 HSMCR30P0CW71 290 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 CD28P10747 220 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 MGMTP16455 207 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 SRMP19623 302 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 GZMHP20718 246 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 CRHBPP24387 322 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 RPS25P62851 125 aaKnown RBP7.75□□□□□ -1.17
TOP3A-211ENST00000581536 PAX5Q02548 391 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 HERPUD1Q15011 391 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 MPV17LQ2QL34 196 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 SYT6Q5T7P8 510 aaPredicted RBP7.75□□□□□ -1.17
TOP3A-211ENST00000581536 RAB12Q6IQ22 244 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 IZUMO2Q6UXV1 221 aa7.75□□□□□ -1.17
TOP3A-211ENST00000581536 ZNF497Q6ZNH5 498 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms