RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 RBMS3Q6XE24 437 aaKnown RBP4.55□□□□□ -1.68
CDH8-206ENST00000580044 C16orf47Q6ZP98 133 aaPredicted RBP4.55□□□□□ -1.68
CDH8-206ENST00000580044 ZNF429Q86V71 674 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 PPP1R3BQ86XI6 285 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 H1FOOQ8IZA3 346 aaPredicted RBP4.55□□□□□ -1.68
CDH8-206ENST00000580044 TMEM252Q8N6L7 170 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 Q8NFD4 153 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 OR52M1Q8NGK5 317 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 M1APQ8TC57 530 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 RLN3Q8WXF3 142 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 NAT6Q93015 286 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 CPNE4Q96A23 557 aaPredicted RBP4.55□□□□□ -1.68
CDH8-206ENST00000580044 ISOC2Q96AB3 205 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 FBXO17Q96EF6 278 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 OR6C1Q96RD1 312 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 RAB40CQ96S21 281 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 PFDN5Q99471 154 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 HDHD3Q9BSH5 251 aaPredicted RBP4.55□□□□□ -1.68
CDH8-206ENST00000580044 PSMG3Q9BT73 122 aaPredicted RBP4.55□□□□□ -1.68
CDH8-206ENST00000580044 C20orf24Q9BUV8 137 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 GGACTQ9BVM4 153 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 PARD6GQ9BYG4 376 aaPredicted RBP4.55□□□□□ -1.68
CDH8-206ENST00000580044 ZNF700Q9H0M5 742 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 SH3BGRL3Q9H299 93 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 ZNF442Q9H7R0 627 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 WFDC1Q9HC57 220 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 ST3GAL6Q9Y274 331 aa4.55□□□□□ -1.68
CDH8-206ENST00000580044 TNRC6AQ8NDV7 1962 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 TRBV6-6A0A0A6YYG2 114 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 A0A0G2JNJ9 132 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 A0A1B0GU03 582 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 LOC102723971A0A1B0GUV8 181 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 A0A1W2PPE3 182 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 IGSF23A1L1A6 192 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 NKX2-6A6NCS4 301 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 ZNF724A8MTY0 619 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 C9J4A7 227 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 E9PLN8 166 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 TSTD3H0UI37 97 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 CLDN34H7C241 214 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 GEMIN2O14893 280 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 SPRY1O43609 319 aaPredicted RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 ANGPTL7O43827 346 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SSSCA1O60232 199 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 RAMP1O60894 148 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 PTBP3O95758 552 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 CYB5R3P00387 301 aaPredicted RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 OPN1MWP04001 364 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 ARG1P05089 322 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 OPN1MW2P0DN77 364 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 OPN1MW3P0DN78 364 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 COX5BP10606 129 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 FGF5P12034 268 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SRD5A2P31213 254 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 PPP1CCP36873 323 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 CD200P41217 278 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 NOVA1P51513 510 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 SSR4P51571 173 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 HBG1P69891 147 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 HBG2P69892 147 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 HLA-DRB3P79483 266 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 DLK1P80370 383 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SERF2P84101 59 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 NHLH2Q02577 135 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 PMS2P11Q13670 270 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 IL11RAQ14626 422 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 PCOLCEQ15113 449 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 RNPS1Q15287 305 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 ELOBQ15370 118 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 ZNF674Q2M3X9 581 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 RSPO1Q2MKA7 263 aaPredicted RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 SP6Q3SY56 376 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 NMSQ5H8A3 153 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SPIN3Q5JUX0 258 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 PHYHD1Q5SRE7 291 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 PLCXD3Q63HM9 321 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SLC25A24Q6NUK1 477 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SPSB3Q6PJ21 355 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 MEX3BQ6ZN04 569 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 AAED1Q7RTV5 226 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 TBC1D26Q86UD7 250 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 MKXQ8IYA7 352 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SELENOHQ8IZQ5 122 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 SLC25A45Q8N413 288 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 ZNF808Q8N4W9 903 aaPredicted RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 ZNF611Q8N823 705 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 ZFP62Q8NB50 900 aaPredicted RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 OR5C1Q8NGR4 320 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 OR5R1Q8NH85 324 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 CLDND2Q8NHS1 167 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 RNASE11Q8TAA1 199 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 SCGB1C1Q8TD33 95 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 DNASE2BQ8WZ79 361 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SLAMF9Q96A28 289 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SPSB4Q96A44 273 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 TMEM45BQ96B21 275 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 PINX1Q96BK5 328 aaKnown RBP4.54□□□□□ -1.68
CDH8-206ENST00000580044 RAB39BQ96DA2 213 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 BTF3L4Q96K17 158 aa4.54□□□□□ -1.68
CDH8-206ENST00000580044 SGCZQ96LD1 299 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms