RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SLC9A3R2Q15599 337 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 LTC4SQ16873 150 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 C6orf183Q5T699 404 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 ZNF626Q68DY1 528 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 TRAT1Q6PIZ9 186 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 C6orf201Q7Z4U5 140 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 FAM89BQ8N5H3 189 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 OR10A7Q8NGE5 316 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 RFESDQ8TAC1 157 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 NDNFQ8TB73 568 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 ZNF596Q8TC21 504 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 FAM216AQ8WUB2 273 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 SSMEM1Q8WWF3 244 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 ARL11Q969Q4 196 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 FAAP24Q9BTP7 215 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 RNF167Q9H6Y7 350 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 TNFRSF19Q9NS68 423 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 KCNIP1Q9NZI2 227 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 DAPK2Q9UIK4 370 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
LITAF-217ENST00000575426 CUBNO60494 3623 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 FAM172BPA6NC97 362 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 METTL21EPA6NDL7 271 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 SOCS1O15524 211 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 ORC5O43913 435 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 RAB6AP20340 208 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 LSM3P62310 102 aaKnown RBP12.37□□□□□ -0.43
LITAF-217ENST00000575426 KRTAP24-1Q3LI83 254 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 Q6ZTK2 550 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 NR2C2APQ86WQ0 139 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 LDLRAD3Q86YD5 345 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 TMEM86BQ8N661 226 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 BEND2Q8NDZ0 799 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 MALSU1Q96EH3 234 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 SULT4A1Q9BR01 284 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 CHMP1AQ9HD42 196 aaPredicted RBP12.37□□□□□ -0.43
LITAF-217ENST00000575426 ZNRD1Q9P1U0 126 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 ATRQ13535 2644 aa12.37□□□□□ -0.43
LITAF-217ENST00000575426 A0A0A6YYD4 124 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 A0A0B4J203 849 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 ODF3BA8MYP8 253 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 NPIPB11E5RHQ5 1161 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 CLDN34H7C241 214 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 LDLRAD4O15165 306 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 SPINT2O43291 252 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 SMIM18P0DKX4 95 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 HTR1DP28221 377 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 SSTR5P35346 364 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 GDNFP39905 211 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 IER3P46695 156 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 ACTG1P63261 375 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 MINOS1Q5TGZ0 78 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 SFXN4Q6P4A7 337 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 SLC16A12Q6ZSM3 486 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 CROCCP3Q8IVE0 287 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 DYRK2Q92630 601 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 PTX4Q96A99 478 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 KIRREL1Q96J84 757 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 C19orf24Q9BVV8 132 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 FUNDC2Q9BWH2 189 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 MEGF9Q9H1U4 602 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 RIMS4Q9H426 269 aaPredicted RBP12.36□□□□□ -0.43
LITAF-217ENST00000575426 LINC00574Q9H8X3 128 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 HSF4Q9ULV5 492 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 MINOS1-NBL1R4GNA1 71 aa12.36□□□□□ -0.43
LITAF-217ENST00000575426 CRYBA1P05813 215 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 RNASE1P07998 156 aaKnown RBP12.35□□□□□ -0.43
LITAF-217ENST00000575426 CLEC2LP0C7M8 214 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 CD34P28906 385 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 MRPS15P82914 257 aaKnown RBP12.35□□□□□ -0.43
LITAF-217ENST00000575426 IDNKQ5T6J7 187 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 C16orf87Q6PH81 154 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 BAIAP2L2Q6UXY1 529 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 LHFPL4Q7Z7J7 247 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 GAPTQ8N292 157 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 PRR18Q8N4B5 295 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 OR13F1Q8NGS4 319 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 OR9G1Q8NH87 305 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 SETD6Q8TBK2 473 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 MDFIQ99750 246 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 SSX3Q99909 188 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 PECRQ9BY49 303 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 ATG5Q9H1Y0 275 aa12.35□□□□□ -0.43
LITAF-217ENST00000575426 A0A087X0M5 115 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 A0A1B0GX30 115 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 SDCBPO00560 298 aaPredicted RBP12.34□□□□□ -0.43
LITAF-217ENST00000575426 TMEM127O75204 238 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 IGHV4-59P01825 116 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 SNRPBP14678 240 aaKnown RBP12.34□□□□□ -0.43
LITAF-217ENST00000575426 RCC1P18754 421 aaPredicted RBP12.34□□□□□ -0.43
LITAF-217ENST00000575426 CEACAM3P40198 252 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 SSX2Q16385 188 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 LRRC75BQ2VPJ9 315 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 GPR141Q7Z602 305 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 ZNF554Q86TJ5 538 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.34□□□□□ -0.43
LITAF-217ENST00000575426 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 OR10R2Q8NGX6 335 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms