RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 IFT22Q9H7X7 185 aa8.22□□□□□ -1.09
TVP23B-208ENST00000575261 ISG20L2Q9H9L3 353 aaKnown RBP8.22□□□□□ -1.09
TVP23B-208ENST00000575261 LIN7CQ9NUP9 197 aaKnown RBP8.22□□□□□ -1.09
TVP23B-208ENST00000575261 IGHV3-72A0A0B4J1Y9 119 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 A0A1W2PPE3 182 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 TMEM30CPA0ZSE6 113 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 HTR3BO95264 441 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.1
TVP23B-208ENST00000575261 GZMHP20718 246 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 IL3RAP26951 378 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 ALDH3A2P51648 485 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 LUMP51884 338 aaPredicted RBP8.21□□□□□ -1.1
TVP23B-208ENST00000575261 GBX2P52951 348 aaPredicted RBP8.21□□□□□ -1.1
TVP23B-208ENST00000575261 RBM11P57052 281 aaKnown RBP8.21□□□□□ -1.1
TVP23B-208ENST00000575261 FOXE3Q13461 319 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 GPR50Q13585 617 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 PNLIPRP3Q17RR3 467 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 DEFB136Q30KP8 78 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 ZIK1Q3SY52 487 aaPredicted RBP8.21□□□□□ -1.1
TVP23B-208ENST00000575261 NHLRC3Q5JS37 347 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 C9orf66Q5T8R8 295 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 LINC00596Q86U02 117 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 LINC00311Q8N616 119 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 Q8N6K4 173 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 SUMF2Q8NBJ7 301 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 OR52M1Q8NGK5 317 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 OR2T10Q8NGZ9 312 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 PYDC1Q8WXC3 89 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 Q96MT0 163 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 JAM3Q9BX67 310 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 DCLRE1BQ9H816 532 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 ERVK13-1Q9NX77 482 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 TAS2R4Q9NYW5 299 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 IL36GQ9NZH8 169 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 AASSQ9UDR5 926 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 ST3GAL6Q9Y274 331 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 GMPPBQ9Y5P6 360 aa8.21□□□□□ -1.1
TVP23B-208ENST00000575261 DYNC2H1Q8NCM8 4307 aaKnown RBP8.2□□□□□ -1.1
TVP23B-208ENST00000575261 TRAV39A0A0B4J263 110 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 E9PI62 339 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 SDCBPO00560 298 aaPredicted RBP8.2□□□□□ -1.1
TVP23B-208ENST00000575261 TXNL1O43396 289 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 CDRT1O95170 752 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 CSTBP04080 98 aaKnown RBP8.2□□□□□ -1.1
TVP23B-208ENST00000575261 ELANEP08246 267 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 GABRB1P18505 474 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 CDX1P47902 265 aaPredicted RBP8.2□□□□□ -1.1
TVP23B-208ENST00000575261 SOX2P48431 317 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 PPP3R1P63098 170 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 RAB40BQ12829 278 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 MPV17LQ2QL34 196 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 Q3ZCU0 254 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 ASCL4Q6XD76 172 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 RNF152Q8N8N0 203 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 C8orf31Q8N9H6 132 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 Q8N9W7 124 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 TMEM104Q8NE00 496 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 OR8H1Q8NGG4 311 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 GPR148Q8TDV2 347 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 NEK7Q8TDX7 302 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 RTN4IP1Q8WWV3 396 aaPredicted RBP8.2□□□□□ -1.1
TVP23B-208ENST00000575261 ARL11Q969Q4 196 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 TMEM106AQ96A25 262 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 S100A13Q99584 98 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 METTL9Q9H1A3 318 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 PAK1IP1Q9NWT1 392 aaPredicted RBP8.2□□□□□ -1.1
TVP23B-208ENST00000575261 GFOD1Q9NXC2 390 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 ZNF581Q9P0T4 197 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 SIRT4Q9Y6E7 314 aaPredicted RBP8.2□□□□□ -1.1
TVP23B-208ENST00000575261 U3KQK5 164 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 DNAH7Q8WXX0 4024 aa8.2□□□□□ -1.1
TVP23B-208ENST00000575261 LINC01548A6NM66 108 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 SEC14L6B5MCN3 397 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 C15orf65H3BRN8 121 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 GEMIN2O14893 280 aaKnown RBP8.19□□□□□ -1.1
TVP23B-208ENST00000575261 ORC5O43913 435 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 MOSP00540 346 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 SERPINA2P20848 420 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 VDAC1P21796 283 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 CD1BP29016 333 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 ZNF93P35789 620 aaPredicted RBP8.19□□□□□ -1.1
TVP23B-208ENST00000575261 CFHR3Q02985 330 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 KIR2DS1Q14954 304 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 KLHL22Q53GT1 634 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 DDI2Q5TDH0 399 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 LCNL1Q6ZST4 164 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 CBR4Q8N4T8 237 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 OR52I1Q8NGK6 324 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 OR52N1Q8NH53 320 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 UBALD1Q8TB05 177 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 C4orf3Q8WVX3 66 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 RGP1Q92546 391 aaPredicted RBP8.19□□□□□ -1.1
TVP23B-208ENST00000575261 PRR25Q96S07 402 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 S1PR3Q99500 378 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 RASL11BQ9BPW5 248 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 AMBNQ9NP70 447 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 RAB9BQ9NP90 201 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 TMEM138Q9NPI0 162 aa8.19□□□□□ -1.1
TVP23B-208ENST00000575261 LSM4Q9Y4Z0 139 aaKnown RBP8.19□□□□□ -1.1
TVP23B-208ENST00000575261 IGHV3-43A0A0B4J1X8 118 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms