RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 BARHL1Q9BZE3 327 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 RIBC2Q9H4K1 309 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 AASSQ9UDR5 926 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 J3QLW9 94 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 MPZL2O60487 215 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 DBTP11182 482 aaKnown RBP14.89□□□□□ -0.03
NUP88-203ENST00000572019 LYL1P12980 280 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 ZNF19P17023 458 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 CCR9P51686 369 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 PAX5Q02548 391 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 ALKBH1Q13686 389 aaKnown RBP14.89□□□□□ -0.03
NUP88-203ENST00000572019 SUMF2Q8NBJ7 301 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 CCDC197Q8NCU1 140 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 OR8J1Q8NGP2 316 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 CYYR1Q96J86 154 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 C4orf36Q96KX1 117 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 GABARAPL3Q9BY60 117 aa14.89□□□□□ -0.03
NUP88-203ENST00000572019 E9PI62 339 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 G3V318 75 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 I3L521 148 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 SULT1B1O43704 296 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 SLC2A2P11168 524 aaPredicted RBP14.88□□□□□ -0.03
NUP88-203ENST00000572019 SPNP16150 400 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 VHLP40337 213 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 SLC16A12Q6ZSM3 486 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 OR10A7Q8NGE5 316 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 CCDC107Q8WV48 283 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 DCUN1D4Q92564 292 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 RNFT2Q96EX2 444 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 DPCDQ9BVM2 203 aaPredicted RBP14.88□□□□□ -0.03
NUP88-203ENST00000572019 GON7Q9BXV9 100 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 ALX4Q9H161 411 aaPredicted RBP14.88□□□□□ -0.03
NUP88-203ENST00000572019 ISG20L2Q9H9L3 353 aaKnown RBP14.88□□□□□ -0.03
NUP88-203ENST00000572019 ISYNA1Q9NPH2 558 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 WSB1Q9Y6I7 421 aa14.88□□□□□ -0.03
NUP88-203ENST00000572019 HYDINQ4G0P3 5121 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 DAPL1A0PJW8 107 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 TRIM64CA6NLI5 447 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 GYG2O15488 501 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 ATP8B1O43520 1251 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 MOSP00540 346 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 VDAC1P21796 283 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 TMED1Q13445 227 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 IL13RA2Q14627 380 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 ZDHHC13Q8IUH4 622 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 PARP16Q8N5Y8 322 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 LINC00311Q8N616 119 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 ZNF491Q8N8L2 437 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 PXT1Q8NFP0 134 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 OR1N2Q8NGR9 330 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 TNFAIP8L1Q8WVP5 186 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 RITA1Q96K30 269 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 RASL11BQ9BPW5 248 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 PDCD1LG2Q9BQ51 273 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 GFOD1Q9NXC2 390 aa14.87□□□□□ -0.03
NUP88-203ENST00000572019 SDCBPO00560 298 aaPredicted RBP14.86□□□□□ -0.03
NUP88-203ENST00000572019 RRP9O43818 475 aaKnown RBP14.86□□□□□ -0.03
NUP88-203ENST00000572019 CDRT1O95170 752 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 IGF1P05019 195 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 MYF6P23409 242 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 CD1BP29016 333 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 PPIFP30405 207 aaKnown RBP14.86□□□□□ -0.03
NUP88-203ENST00000572019 SOX6P35712 828 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 ZNF134P52741 427 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 ADAMTSL5Q6ZMM2 481 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 SATL1Q86VE3 508 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 ARL11Q969Q4 196 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 FAM192AQ9GZU8 254 aa14.86□□□□□ -0.03
NUP88-203ENST00000572019 SIRT4Q9Y6E7 314 aaPredicted RBP14.86□□□□□ -0.03
NUP88-203ENST00000572019 HTR3BO95264 441 aa14.85□□□□□ -0.03
NUP88-203ENST00000572019 CNTFRP26992 372 aa14.85□□□□□ -0.03
NUP88-203ENST00000572019 ZNF529Q6P280 563 aa14.85□□□□□ -0.03
NUP88-203ENST00000572019 KCTD20Q7Z5Y7 419 aa14.85□□□□□ -0.03
NUP88-203ENST00000572019 SERPINA12Q8IW75 414 aa14.85□□□□□ -0.03
NUP88-203ENST00000572019 ZNF439Q8NDP4 499 aa14.85□□□□□ -0.03
NUP88-203ENST00000572019 RGP1Q92546 391 aaPredicted RBP14.85□□□□□ -0.03
NUP88-203ENST00000572019 RFKQ969G6 155 aa14.85□□□□□ -0.03
NUP88-203ENST00000572019 A0A1W2PP11 408 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 GEMIN2O14893 280 aaKnown RBP14.84□□□□□ -0.03
NUP88-203ENST00000572019 OR8U8P0C7N1 319 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 SLURP1P55000 103 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 ZNF616Q08AN1 781 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 DNAL1Q4LDG9 190 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 ASCL4Q6XD76 172 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 C5orf24Q7Z6I8 188 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 LHFPL3Q86UP9 236 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 OR5D14Q8NGL3 314 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 CASTOR1Q8WTX7 329 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 DLX4Q92988 240 aaPredicted RBP14.84□□□□□ -0.03
NUP88-203ENST00000572019 UBE2E2Q96LR5 201 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 CITED4Q96RK1 184 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 PALMDQ9NP74 551 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 FAM118AQ9NWS6 357 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 TAS2R4Q9NYW5 299 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 ZNF107Q9UII5 783 aaPredicted RBP14.84□□□□□ -0.03
NUP88-203ENST00000572019 OAZ3Q9UMX2 235 aa14.84□□□□□ -0.03
NUP88-203ENST00000572019 ATP6V0E1O15342 81 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 OR7C1O76099 320 aaPredicted RBP14.83□□□□□ -0.04
NUP88-203ENST00000572019 IGLV1-40P01703 118 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 GP9P14770 177 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms